New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1015699	58 (0.960)	5 (0.090)	5/256	NT	7.9%	coding (542/1431 nt)	PP_0875	hypothetical protein
	?	NC_002947	= 1015729	61 (1.050)					coding (512/1431 nt)	PP_0875	hypothetical protein

CGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCAC‑TGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCGGGCTGTAAATGGCTCCAAACGCATTGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1015549‑1015699 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgaGCCCCGAGCAGCTGGGGAGCCAGCTGCGGGTCAGCAATGCGTTTGGAGCCATTTACAGCCCGCACACGGCGACCATCCAGCCAGCCAAGCTGGTGCGCGGCCTTGCCCGGGCAGTGGAGGCGCTGGGCGTATCGATCTACGAA  <  NC_002947/1015729‑1015587                                                                                                                                                                                                                                                                                                         CGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCAC‑TGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCGGGCTGTAAATGGCTCCAAACGCATTGCT                                                                                                                                                   >  7:118248/1‑149  GCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCAC‑TGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCGGGCTGTAAATGGCTCCAAACGCATTGCT                                                                                                                                                   >  2:371536/1‑148   CACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCAC‑TGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCGGGCTGTAAATGGCTCCAAACGCATTGCTGA                                                                                                                                                 >  1:300280/1‑149    ACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCACGAGCCCGGGCAAGGCCGCGCACCAGCTTGGATGGATGTATGTTCGCCGTGTGCGGGCTGTAAATGGCTCCAAACGCATTGCTGA                                                                                                                                                 >  1:111726/1‑149                  CCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCAC‑TGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCGGGCTGTAAATGGCTCCAAACGCATTG                                                                                                                                                     <  5:155216/130‑1                  CCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCAC‑TGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCGGGCTGTAAATGGCTCCAAACGCATTG                                                                                                                                                     >  6:155216/1‑130                            GCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCAC‑TGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCGGGCTGTAAATGGCTCCAAACGCATTGCTGA‑‑CCC‑‑GCAGCTGGGGAGCCAGCTGCGG                                                                                                                    <  2:111726/149‑1                            GCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCAC‑TGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCGGGCTGTAAATGGCTCCAAACGCATTGCTGA‑‑CCC‑‑GCAGCTGGGGAGCCAGCTGCG                                                                                                                     <  1:324057/148‑1                                          GTAGATCGATACGCCCAGCGCCTCCAC‑TGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGTATGGTCGCCGTGTGCGGTCTGTAAATGGCTCCAAACGCATTGCTGAGCCCCGAGCAGCTGGGGAGCCAGCTGCGGGTCAGCAAT                                                                                                           <  4:62212/148‑1                                                      GCCCAGCGCCTCCAC‑TGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCGGGCTGTAAATGGCTCCAAACGCATTGCTGAGCCCCGAGCAGCTGGGGAGCCAGCTGCGGGTCAG                                                                                                               <  7:142138/132‑1                                                      GCCCAGCGCCTCCAC‑TGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCGGGCTGTAAATGGCTCCAAACGCATTGCTGAGCCCCGAGCAGCTGGGGAGCCAGCTGCGGGTCAG                                                                                                               >  8:142138/1‑132                                                                                                                                                    GCTGAGCCCCGAGCAGCTGGGGAGCCAGCTGCGGGTCAGCAATGCGTTTGGAGCCATTTACAGCCCGCACACGGCGACCATCCAGCCAGCCAAGCTGGTGCGCGGCCTTGCCCGGGCAGTGGAGGCGCTGGGCGTATCGATCTACGAA  >  1:25151/1‑148                                                                                                                                                      TGAGCCCCGAGCAGCTGGGGAGCCAGCTGCGGGTCAGCAATGCGTTTGGAGCCATTTACAGCCCGCACACGGCGACCATCCAGCCAGCCAAGCTGGTGCGCGGCCTTGCCCGGG                                  <  5:213064/114‑1                                                                                                                                                      TGAGCCCCGAGCAGCTGGGGAGCCAGCTGCGGGTCAGCAATGCGTTTGGAGCCATTTACAGCCCGCACACGGCGACCATCCAGCCAGCCAAGCTGGTGCGCGGCCTTGCCCGGG                                  >  6:213064/1‑114                                                                                                                                                                                                                                                                                                         CGCACCTCGCTCGGCTGCCAGTCGATGGCCGGGGTATTTTCGTAGATCGATACGCCCAGCGCCTCCAC‑TGCCCGGGCAAGGCCGCGCACCAGCTTGGCTGGCTGGATGGTCGCCGTGTGCGGGCTGTAAATGGCTCCAAACGCATTGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1015549‑1015699 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgaGCCCCGAGCAGCTGGGGAGCCAGCTGCGGGTCAGCAATGCGTTTGGAGCCATTTACAGCCCGCACACGGCGACCATCCAGCCAGCCAAGCTGGTGCGCGGCCTTGCCCGGGCAGTGGAGGCGCTGGGCGTATCGATCTACGAA  <  NC_002947/1015729‑1015587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.