New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1346979 = | 60 (1.000) | 4 (0.070) | 4/256 | NT | 6.4% | intergenic (‑87/+317) | udh/galP‑I | uronate dehydrogenase/porin‑like protein |
? | NC_002947 | 1347037 = | 59 (1.020) | intergenic (‑145/+259) | udh/galP‑I | uronate dehydrogenase/porin‑like protein |
GGTTTACCCGCGAATACGGTGGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGCCTGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCATTTCTTACCCGCGAAAGGCCGGCAAAAGCCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1347131‑1346979 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCC > NC_002947/1347037‑1347183 GGTTTACCCGCGAATACGGTGGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGCCTGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCATTTCTTACCCGCGAAAGGCCGGCAAAAGCC > 2:98869/1‑149 TTTACCCGCGAATACGGTGGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGCCTGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCATTTCTTACCCGCGAAAGGCCGGCAAAAGCCGC < 5:355219/149‑1 TTACCCGCGAATACGGTGGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGCCTGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCATTTCTTACCCGCGAAAGGCCGGCAAAAGCCGCC > 7:245064/1‑149 ACCCGCGAATACGGTGGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGCCTGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCATTTCTTACCCGCGAAAGGCCGGCAAAAGCCGCCC < 2:311257/148‑1 ACCCGCGAATACGGTGGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGCCTGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCATTTCTTACCCGCGAAAGGCCGGCAAAAGCCGCCC > 7:251929/1‑148 CTTTCGCATTTCTTACCCGCGAAAGGCCGGCAAAAGCCGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACC > 4:297974/1‑149 ATTTCTTACCCGCGAAAGGCCGGCAAAAGCCGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGG > 3:203893/1‑123 ATTTCTTACCCGCGAAAGGCCGGCAAAAGCCGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGG < 4:203893/123‑1 ACCCGCGAAAGGCCGGCAAAAGCCGCCCGTAGGAGCGTGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTG < 3:297974/147‑1 GCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGG < 2:52580/149‑1 CCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCC > 6:115790/1‑149 CCGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCC > 8:97139/1‑149 GGTTTACCCGCGAATACGGTGGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGCCTGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCATTTCTTACCCGCGAAAGGCCGGCAAAAGCCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1347131‑1346979 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGGCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCAATGGTGGACACACATCGGAGGTTGGGCGCAGGCC > NC_002947/1347037‑1347183 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |