New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1506411	55 (0.910)	3 (0.050)	3/256	NT	5.1%	coding (312/780 nt)	petC	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit
	?	NC_002947	= 1506453	59 (1.020)					coding (354/780 nt)	petC	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit

CACAGTGCCAAGTTCCAGCGCTACGAGCGGGTGGCTGACGACCTGGGTATCCCGCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1506259‑1506411 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggtACCGCGCACGCGGGCGACCAGTGTCAGGTCGGGCGGCGCAGCACCGAACCAGGTCTTGGCGTCGCTGGGCTTCATACCGATCTGCATGTGGTCACCGATCTTGGCACCTGTGAACACCAGCTTCTCGAGCATCAGTTCATGCGGGA  <  NC_002947/1506453‑1506308                                                                                                                                                                                                                                                                                                             CACAGTGCCAAGATCCAGCGCTACGAGCGGGTGGCTGACGACCTGGGTATCCCGCATGAACTGATGCTCGAGAAGCTGGTGGTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGCAGCCCAGCGACGCCAAGACCTGGTT                                                                                                                                                        <  2:121565/149‑1          atGTTCCAGCGCTAGGTGCGGGTGGAGGAGGACCTGGGTATCGCGCATGAACTGATCGTCGAGAAGCTGGTGTTCACACGTGCCAAGATGGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACGTGGTT                                                                                                                                                        <  6:59394/138‑1          AAGTTCCAGCGCTACGAGCGGGTGGCTGACGACCTGGGTATCCCGCATGAACTGATGCGCGAGAAGCTGGTGTTCACAGGTGCCAACATAGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCacatccg                                                                                                                                                >  5:59394/1‑141                                              GGTATCCCGCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACCTGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTACCGCGCACGCGGGCGACCAGTGTCAGGTCGGGCGGCGC                                                                                                             <  8:257892/147‑1                                                  TCCCGCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTACCGCGCACGCGGGCGACCAGTGTCAGGTCGGGCGGCGCAGCAC                                                                                                        <  2:49163/148‑1                                                        ATGAACGGATGCGCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCCCATGCAGATCGGTCGGAAGCCCAGCGACGCCAAGACCTGGTGCGGTACCGCGCACGCGGGCGACCAGTGTCAGGGCGGGCGGCGCAGCACCGAACCA                                                                                                 <  2:131736/149‑1                                                                                                                                                       GGTACCGCGCACGCGGGCGACCAGTGTCAGGTCGGGCGGCGCAGCACCGAACCAGGTCTTGGCGTCGCTGGGCTTCATACCGATCTGCATGTGGTCACCGATCTTGGCACCTGTGAACACCAGCTTCTCGAGCATCAGTTCATGCGGGA  <  2:100246/149‑1                                                                                                                                                                                                                                                                                                             CACAGTGCCAAGTTCCAGCGCTACGAGCGGGTGGCTGACGACCTGGGTATCCCGCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1506259‑1506411 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggtACCGCGCACGCGGGCGACCAGTGTCAGGTCGGGCGGCGCAGCACCGAACCAGGTCTTGGCGTCGCTGGGCTTCATACCGATCTGCATGTGGTCACCGATCTTGGCACCTGTGAACACCAGCTTCTCGAGCATCAGTTCATGCGGGA  <  NC_002947/1506453‑1506308

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.