New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1506411	55 (0.910)	3 (0.050)	3/256	NT	5.1%	coding (312/780 nt)	petC	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit
	?	NC_002947	= 1506453	59 (1.020)					coding (354/780 nt)	petC	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit

TCCCGCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCTGGTGGGTCTGCAAGGTAACCAGGTGGTGGGTTGCAAGCAGGT  >  NC_002947/1506308‑1506599                                                                                                                                                   |                                                                                                                                                   tCCCGCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTacc                                                                                                                                                 <  2:100246‑M2/149‑4 (MQ=255)     gCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGAtt                                                                                                                                             <  6:295778/149‑1 (MQ=255)     gCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGAtt                                                                                                                                             >  5:67489/1‑149 (MQ=255)      cATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTg                                                                                                                                            >  8:316390/1‑149 (MQ=255)       aTGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTgg                                                                                                                                           >  6:311238/1‑149 (MQ=255)                 gCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACacc                                                                                                                                  >  4:29547/1‑148 (MQ=255)                     gagaAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGTCCGCCCGCGTGCGCGGTACCGATTGGCTTTac                                                                                                                                     <  1:223402/142‑1 (MQ=255)                     gagaAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTac                                                                                                                                     >  2:223402/1‑141 (MQ=255)                     gagaAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACacctacct                                                                                                                             <  1:153610/149‑1 (MQ=255)                          gCTGGTGTTCACAGGTGCCAAGAAAGGTGACCACATGCAGATCGGGATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTCCGACGCCCGACCTGACACTGGT‑CTCCCGCGTCCGCGGAACCGATAGGCTTTACACGTACCAGCGCa                                                                                                                        >  6:94095/1‑149 (MQ=255)                            tGGTGTTCACAGGTGCCAAGATCGGTGACCACAAGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGt                                                                                                                      >  1:239297/1‑149 (MQ=255)                             ggTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGtt                                                                                                                     >  1:342650/1‑149 (MQ=255)                                      aGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAgg                                                                                                            <  5:225258/149‑1 (MQ=255)                                           ccAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGAccc                                                                                                        >  6:25265/1‑148 (MQ=255)                                            cAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGCCCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCAGCGTGCGCGGTACCGATTCGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCAt                                                                                                      >  8:49491/1‑149 (MQ=255)                                             aaGATCGTTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATc                                                                                                     <  5:29085/149‑1 (MQ=255)                                                         cacaTGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGcc                                                                                                <  2:175495/142‑1 (MQ=255)                                                         cacaTGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGcc                                                                                                >  1:175495/1‑142 (MQ=255)                                                         cacaTGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATgg                                                                                         >  1:272650/1‑149 (MQ=255)                                                           caTGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATgggg                                                                                       >  2:144344/1‑149 (MQ=255)                                                            aTGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACTTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGt                                                                                      >  5:242581/1‑149 (MQ=255)                                                            aTGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGt                                                                                      <  1:100246/149‑1 (MQ=255)                                                              gCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATg                                                                                                               <  6:118565/122‑1 (MQ=255)                                                              gCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATg                                                                                                               >  5:118565/1‑122 (MQ=255)                                                               cAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGa                                                                                    <  5:94095/148‑1 (MQ=255)                                                                aGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACGTGACAGTGGT‑CGCCCGCGTGCGCGGGACCGAGTGGCTGTACACGTACCTGCGCAGTTGCTAGGAGGACCCATCCCGCGCTTGTGGGGTGaa                                                                                   >  8:243043/1‑148 (MQ=255)                                                                aGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTTCCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGaa                                                                                   >  1:3115/1‑148 (MQ=255)                                                                      ggaggacgCCCCGCGACGCCCCGTCCGCGCTCGGCGCTGCGCCGCCCGACCTGACACTCGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAg                                                                            <  4:275577/142‑1 (MQ=255)                                                                      gTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCtt                                                                                             <  4:24591/132‑1 (MQ=255)                                                                      gTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCtt                                                                                             >  3:24591/1‑132 (MQ=255)                                                                       tATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAgg                                                                           <  3:29547/149‑1 (MQ=255)                                                                         tGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGAc                                                                                                          >  6:219639/1‑116 (MQ=255)                                                                         tGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGAc                                                                                                          <  5:219639/116‑1 (MQ=255)                                                                          gAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTAt                                                                        >  6:118355/1‑149 (MQ=255)                                                                             gCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACGTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGTTATTcc                                                                     <  2:239297/149‑1 (MQ=255)                                                                             gCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGTCTTTACACCGAACTGCGCACTTTCTATGAGGAACCATCCCGCCCTGATGGGGGGAAAAACAAGGTATTcc                                                                     >  4:320310/1‑149 (MQ=255)                                                                               ccAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTccc                                                                    >  5:143755/1‑148 (MQ=255)                                                                                      cGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTg                                                            <  5:311238/149‑1 (MQ=255)                                                                                      cGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTg                                                            <  6:67489/149‑1 (MQ=255)                                                                                         cAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCa                                                         >  5:91001/1‑149 (MQ=255)                                                                                         cAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCa                                                         <  3:37043/149‑1 (MQ=255)                                                                                          aaGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCAt                                                        <  5:25265/149‑1 (MQ=255)                                                                                          aaGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCGAATGGGGTGAACAAAAAGGTAATCCCGAACGTTGGCAt                                                        >  5:340335/1‑149 (MQ=255)                                                                                           aGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATg                                                       <  7:316390/149‑1 (MQ=255)                                                                                               cTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCt                                                    >  5:180972/1‑148 (MQ=255)                                                                                                tGGTTCGGTGCTGCGCCGCCCGCCCTGACACTGGT‑CGCCCGCGTGCGCGGTaccgcaccaggtcttggcgtcgctgggcttccgaccgatctgcatggggtcaccgatcttggcacctgtgaacaccagcttctcgcgcatccgttcat                                                  <  2:131736‑M2/149‑99 (MQ=255)                                                                                                  gTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACg                                                >  3:355685/1‑149 (MQ=255)                                                                                                       gTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTaccgaaccaggtcttggcgtcgctgggcttcataccgatctgcatgtggtcaccgatcttggcacctgtgaacaccagcttctcgagcatcagttcatgcggga                                            <  2:49163‑M2/148‑105 (MQ=255)                                                                                                       gTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCtg                                           >  5:199556/1‑149 (MQ=255)                                                                                                       gTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCtg                                           <  2:342650/149‑1 (MQ=255)                                                                                                        tgctgcGCCGCCCGACCTGACACTGGT‑CGCACGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCtgg                                          <  8:240032/149‑1 (MQ=255)                                                                                                          ctgcGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCtggt                                         <  7:66522/148‑1 (MQ=255)                                                                                                            gcgcCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTaccgaaccaggtcttggcgtcgctgggcttcataccgatctgcaggtggtcaccgatcttggcacctgtgaacaccagcttctcgagcatcagttcatgcgggatacc                                        <  8:257892‑M2/147‑109 (MQ=255)                                                                                                            gcgcCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCTGGTggg                                      >  2:15339/1‑149 (MQ=255)                                                                                                                   ccGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCTGGTGGGTCTGCaa                               <  5:118355/149‑1 (MQ=255)                                                                                                                    cGACCTTACACAGGT‑AGCCCGCGGGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTATTTGATGACCCATCCCGCCCTTATGGGTTGAAGAACAAGGTATACCCGTACGTTGTCATGCCTTACGTTCTGGTGGGTCTGGAAg                              <  4:277579/149‑1 (MQ=255)                                                                                                                    cGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTCTGTGTACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGGATGCCTAACGTGCTGGTGGGTCTGCAAg                              <  7:243043/149‑1 (MQ=255)                                                                                                                     gACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCTGGTGGGTCTGCAAgg                             <  2:272650/149‑1 (MQ=255)                                                                                                                        cTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTac                                                                                                                                     <  7:260260/42‑1 (MQ=255)                                                                                                                        cTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTac                                                                                                                                     >  8:260260/1‑42 (MQ=255)                                                                                                                         tGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCTGGTGGGTCTGGAAGGTAAc                         >  6:251392/1‑149 (MQ=255)                                                                                                                                 gT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCTGGTGGGTCTGCAAGGTAACCAggtggt                 >  8:199728/1‑149 (MQ=255)                                                                                                                                  t‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCTGGTGGGTCTGCAAGGTAACCAGgtggtg                >  1:333831/1‑149 (MQ=255)                                                                                                                                  t‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCTGGTGGGTCTGCAAGGTAACCAGgtggtg                <  2:333831/149‑1 (MQ=255)                                                                                                                                       ccGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCTGGTGGGTCTGCAAGGTAACCAGGTGGTGGGtt            <  6:91001/149‑1 (MQ=255)                                                                                                                                         gcgTGCGCGGTACCGATTGGCTTTACACCTTCCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCTGGTGGGTCTGCAAGGTAACCAGGTGGTGGGTTGc          <  2:3115/149‑1 (MQ=255)                                                                                                                                              cgcgGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCTGGTGGGTCTGCAAGGTAACCAGGTGGTGGGTTGCAAGc      <  6:180972/148‑1 (MQ=255)                                                                                                                                               ggggTACCGATTGGCTTTACACCTACCTGAGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCTGGTGGGTCTGCAAGGTAACCAGGTGGTGGGTTGCAAGCAg    <  7:49491/147‑1 (MQ=255)                                                                                                                                                 ggTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCTGGTGGGTCTGCAAGGTAACCAGGTGGTGGGTTGCAAGCAGGt  >  1:179968/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                   TCCCGCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTGCTGCGCCGCCCGACCTGACACTGGT‑CGCCCGCGTGCGCGGTACCGATTGGCTTTACACCTACCTGCGCAGTTTCTATGAGGACCCATCCCGCCCTTATGGGGTGAACAACAAGGTATTCCCGAACGTTGGCATGCCTAACGTGCTGGTGGGTCTGCAAGGTAACCAGGTGGTGGGTTGCAAGCAGGT  >  NC_002947/1506308‑1506599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.