New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1636406 =	52 (0.860)	3 (0.050)	3/250	NT	5.8%	coding (583/684 nt)	recO	DNA repair protein RecO
	?	NC_002947	1636446 =	49 (0.870)					coding (623/684 nt)	recO	DNA repair protein RecO

CTGTGAGTCACGAAAGGCTCTCCTGAAGATTGAGCCCAACAGCATACGTCCTGATCAGCGCTTGCGAAACAGTTCCCGGCTGACCAGCGGTTTTGCCCCCAGGTGAACTGCCAGTGCCTGGCGCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1636561‑1636406 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccaggCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGTGACTCACAGCAACCGCATGCTTCTTGGCGTCAACATCGA  >  NC_002947/1636446‑1636591                                                                                                                                                                                                                                                                                                                CTGTGAGTAACGAAAGGCTCTCCTGAAGATTGAGCCCAAAAGCATACGTCCTGATCAGCGCTTGCGAAACAGTTCCCGGCTGACCAGCGGTTTTGCCCCCAGGTGAACTGCCAGTGCCTTGCGCATCAGCCGCTTTGCAGCGAGAAAGG                                                                                                                                                           >  7:27779/1‑149  TGTGAGTCACGAAAGGCTCTCCTGAAGATTGAGCCCAACAGCATACGTCCTGATCAGCGCTTGCGAAACAGTTCCCGGCTGACCAGCGGTTTTGCCCCCAGGTGAACTGCCAGTGCCTGGCGCATCAGCCGCTTTGCAGCGAGCAAGGC                                                                                                                                                          >  8:35926/1‑149                                                                                                                      CTGGCGCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGTGA                                       >  7:351691/1‑148                                                                                                                      CTGGCGCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGTGA                                       <  8:351691/148‑1                                                                                                                       TGGCGCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGTGACT                                     >  8:192761/1‑149                                                                                                                                                          AGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGTGACTCACAGCAACCGCATGCTTCTTGGCGTCAACATCGA  <  7:192761/149‑1                                                                                                                                                                                                                                                                                                                CTGTGAGTCACGAAAGGCTCTCCTGAAGATTGAGCCCAACAGCATACGTCCTGATCAGCGCTTGCGAAACAGTTCCCGGCTGACCAGCGGTTTTGCCCCCAGGTGAACTGCCAGTGCCTGGCGCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1636561‑1636406 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccaggCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGTGACTCACAGCAACCGCATGCTTCTTGGCGTCAACATCGA  >  NC_002947/1636446‑1636591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.