New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1636406 = | 52 (0.860) | 3 (0.050) | 3/250 | NT | 5.8% | coding (583/684 nt) | recO | DNA repair protein RecO |
? | NC_002947 | 1636446 = | 49 (0.870) | coding (623/684 nt) | recO | DNA repair protein RecO |
AACCAAGACGTCAACGACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGT > NC_002947/1636259‑1636552 | aaCCAAGACGTCAACGACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCAc < 6:14550/148‑1 (MQ=255) tcgatgttgacgccaagaagcatgcggttgctgtgagtcacgaaaggctctcctgaagattgagcccaacagcatacgtcctgatcagcgcttgcgaaacagttcccggctgaccagcggttttgcccccaggtgaactgccagtgCCt < 7:192761‑M1/3‑1 (MQ=255) gTCAACGACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCtt > 1:182511/1‑149 (MQ=255) aaCGACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCt > 2:276593/1‑149 (MQ=255) gaacAGCCGATTGCCGCCGACGGCCGGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCTGCCCGGCCTGTTTCGGGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGc < 1:229491/146‑1 (MQ=255) aCCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGGTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCt < 3:143489/149‑1 (MQ=255) cAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTg > 2:95696/1‑148 (MQ=255) aGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCTTGGATGCCGGCCTGGACCGGGTCGACCTCTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGAACCTCGCGCCTTGATCGATGc > 8:27779/1‑148 (MQ=255) gATTGCCGCCGACGGGCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCTAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGGAGCCGACTGGGACGCACCTGGCGCCTTGCTCGGTGCAAAGc < 7:128511/149‑1 (MQ=255) gATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGc < 3:14130/149‑1 (MQ=255) tcgccgACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCt > 5:79276/2‑148 (MQ=255) agtcacgaaaggctctcctgaagattgagcccaacagcatacgtcctgatcagcgcttgcgaaacagttcccggctgaccagcggttttgcccccaggtgaactgccagtgCCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCa > 8:192761‑M1/112‑149 (MQ=255) tcacgaaaggctctcctgaagattgagcccaacagcatacgtcctgatcagcgcttgcgaaacagttcccggctgaccagcggttttgcccccaggtgaactgccagtgCCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAg < 8:351691‑M1/39‑1 (MQ=255) tcacgaaaggctctcctgaagattgagcccaacagcatacgtcctgatcagcgcttgcgaaacagttcccggctgaccagcggttttgcccccaggtgaactgccagtgCCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAg > 7:351691‑M1/110‑148 (MQ=255) gTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCAc > 4:116786/1‑149 (MQ=255) tATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACt > 4:139651/1‑149 (MQ=255) tCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTgg < 2:182511/149‑1 (MQ=255) tCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTg < 5:95945/148‑1 (MQ=255) ccTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCGAAGCGGCTGATGCGCCAGGCACTGGCAg < 3:116786/149‑1 (MQ=255) ccTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAg > 8:79198/1‑149 (MQ=255) ccTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAg < 1:276593/149‑1 (MQ=255) gcgcGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGtt > 5:161615/1‑148 (MQ=255) gcgTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCAc < 6:85395/149‑1 (MQ=255) gTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGGAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCt > 4:300174/1‑149 (MQ=255) gCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTggggg > 6:333403/1‑148 (MQ=255) gCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTggggg > 4:120188/1‑148 (MQ=255) cGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCa > 4:331917/1‑148 (MQ=255) ggAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGgcgc > 2:113839/1‑87 (MQ=255) ggAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGgcgc < 1:113839/87‑1 (MQ=255) cGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTgg < 1:95696/148‑1 (MQ=255) gCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGt > 7:304227/1‑149 (MQ=255) gCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGt > 5:377429/1‑149 (MQ=255) gCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGt > 1:22113/1‑149 (MQ=255) gCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTc < 5:163542/149‑1 (MQ=255) gCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTc < 3:139651/149‑1 (MQ=255) cccGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCg > 3:235989/1‑149 (MQ=255) ggCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCaa < 3:331917/149‑1 (MQ=255) tttCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAgcgc < 4:235989/147‑1 (MQ=255) tgcgATCGAGTGTCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTgg < 2:235472/98‑1 (MQ=255) gcatgcGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAgg < 1:317084/144‑1 (MQ=255) gATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTgggg < 2:4773/100‑1 (MQ=255) gATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTgggg > 1:4773/1‑100 (MQ=255) gATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGAc < 6:79276/149‑1 (MQ=255) tCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGTAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGt < 3:120188/149‑1 (MQ=255) aGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATg < 6:161615/149‑1 (MQ=255) gCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGt > 6:1320/1‑149 (MQ=255) cTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACCGTTTCGCAAGCGCTGATCAGGACGTATGCTGtt < 6:78844/149‑1 (MQ=255) tGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTg > 3:9548/1‑149 (MQ=255) tGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTg < 7:79198/149‑1 (MQ=255) ccTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCt < 8:304227/149‑1 (MQ=255) ccTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCt > 8:59284/1‑149 (MQ=255) cTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTg < 4:217544/141‑1 (MQ=255) cTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTg > 3:217544/1‑141 (MQ=255) cGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAg > 2:263485/1‑147 (MQ=255) cGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGga < 3:300174/149‑1 (MQ=255) tGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGc > 3:348585/1‑149 (MQ=255) gACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCtt < 5:333403/149‑1 (MQ=255) gCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCg > 2:182878/1‑149 (MQ=255) cACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGt < 7:59284/149‑1 (MQ=255) aCCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCt < 4:98203/101‑1 (MQ=255) aCCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCt > 3:98203/1‑101 (MQ=255) | AACCAAGACGTCAACGACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGT > NC_002947/1636259‑1636552 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |