| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1690012 | 39 (0.650) | 5 (0.090) | 5/254 | NT | 10.8% | coding (819/1146 nt) | ydcS | polyamine ABC transporter, periplasmic polyamine‑binding protein |
| ? | NC_002947 | = 1690047 | 45 (0.780) | coding (784/1146 nt) | ydcS | polyamine ABC transporter, periplasmic polyamine‑binding protein | |||||
CCGGCAACGAGCCGAACCAGGCCGCCACATCGCCTTGCACCTTAGGTTGCAACGACCAGTCCATCCACTTGTAGGCGCAATTGGGGTGCTTGGCCTCGGCGTGCAGCATGGTGGTGTCGGCCCAGCCGGTCGCGCCCTCCTTGGGAATGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1689861‑1690012‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggtcAATGGCCTCAAGGCCGAGAACCAGCCAGTGGCCTCGACCATTCCCAAGGAGGGCGCGACCGGCTGGGCCGACACCACCATGCTGCACGCCGAGGCCAAGCACCCCAATTGCGCCTACAAGTGGATGGACTGGTCGTTGCAACCTAAG < NC_002947/1690047‑1689901 CCGGCAACGAGCCTAACCAGGCCGCCACATCGCCTTGCACCTTAGGTTGCAACGACCAGTCCATCCACTTGTAGGCGCAATTGGGGTGCTTGGCCTCGGCGTGCAGCATGGTGGTGTCGGCCCAGCCGGTCGCGCCCTCCTTGGGAATG < 8:335253/149‑1CCGGCAACGAGCCGAACCAGGCCGCGACATCGGCTTGCACCTTATGTTGCAACGACCAGTCCATCCACTTTTAGTAGCAATTGGGGTGCTTGGCCTCGGCGTGCAGCATGGTGGTGTCGGCCCAGCCGGTCGCGCCCTCCTTGGGAATG < 6:173994/149‑1 GCAACGAGCCGAACCAGGCCGCCTCATCGCCTTGCACCTTAGGTTGCAACGACCAGTCCATCCACTTGTAGGCGCTTTTGGGGTGCTTGGCCTCGGCGTGCAGCATGGTGGTGTCGGCCCAGCCGGTCGCGCCCTCCTTGGGAATGGTC < 7:273497/149‑1 GCAACGAGCCGAACCAGGCCGCCACATCGCCTTGCACCTTAGGTTGCAACGACCAGTCCATCCACTTGTAGGCGCACTTGGGGTGCTTGGCCTCGGCGTGCAGCATGGTGGTGTCGGCCCAGCCGGTCGCGCCCTCCTTGGGAATGGTC < 6:118911/149‑1 CAACGACCAGTCCATCCACTTGTAGGCGCAATTGGGGTGCTTGGCCTCGGCGTGCAGCATGGTGGTGTCGGCCCAGCCGGTCGCGCCCTCCTTGGGAATGGTCAATGGCCTCAAGGCCGAGAACCAGCCAGTGGCCTCGACCATTCCC < 5:154554/148‑1 CAACGACCAGTCCATCCACTTGTAGGCGCAATTGGGGTGCTTGGCCTCGGCGTGCAGCATGGTGGTGTCGGCCCAGCCGGTCGCGCCCTCCTTGGGAATGGTC > 3:159156/1‑103 CAACGACCAGTCCATCCACTTGTAGGCGCAATTGGGGTGCTTGGCCTCGGCGTGCAGCATGGTGGTGTCGGCCCAGCCGGTCGCGCCCTCCTTGGGAATGGTC < 4:159156/103‑1 AACGACCAGTCCATCCACTTGTAGGCGCAATTGGGGTGCTTGGCCTCGGCGTGCAGCATGGTGGTGTCGGCCCAGCCGGTCGCGCCCTCCTTGGGAATGGTCAATGGCCTCAAGGCCGAGAACCAGCCAGTGGCCTCGACCATTCCC > 3:349899/1‑147 ACGACCAGTCCATCCACTTGTAGGCGCAATTGGGGTGCTTGGCCTCGGCGTGCAGCATGGTGGTGTCGGCCCAGCCGGTCGCGCCCTCCTTGGGAATGGTCAATGGCCTCAAGGCCGAGAACCAGCCAGTGGCCTCGACCATTCCCAAG < 4:349899/149‑1 ACTTGTAGGCGCAATTGGGGTGCTTGGCCTCGGCGTGCAGCATGGTGGTGTCGGCCCAGCCGGTCGCGCCCTCCTTGGGAATGGTCGA‑GGCCTCAAGGCCGAGAACCAGCCAGTGGCCTCGA < 5:290531/122‑1 ACTTGTAGGCGCAATTGGGGTGCTTGGCCTCGGCGTGCAGCATGGTGGTGTCGGCCCAGCCGGTCGCGCCCTCCTTGGGAATGGTCGA‑GGCCTCAAGGCCGAGAACCAGCCAGTGGCCTCGA > 6:290531/1‑122 TCAATGGCCTCAAGGCCGAGAACCAGCCAGTGGCCTCGCCCATTCCCAAGGAGGGCGCGACCGGCTGGGCCGACACCACCATGCTGCACGCCGCGGCCAAGCACCCCAAATGCGCCGACAAGTGGATGGACTGGTCGTTGCAACCTAAG > 7:5301/1‑149 TCAATGGCCTCAAGGCCGAGAACCAGCCAGTGGCCTCGACCATTCCCAAGGAGGGCGCGACCGGCTGGGCCGACACCACCATGCTGCACGCCGAGGCCAAGCACCCCAATTGCGCCTACAAGTGGATGGACTGGTCGTTGCAACCTAAG < 1:305374/149‑1 TCAATGGCCTCAAGGCCGAGAACCAGCCAGTGGCCTCGACCATTCCCAAGGAGGGCGCGACCGGCTGGGCCGACACCACCATGCTGCACGCCGAGGCCAAGCACCCCAATTGCGCCTACAAGTGGATGGACTGGTCGTTGCAACCTAAG < 6:22446/149‑1 CCGGCAACGAGCCGAACCAGGCCGCCACATCGCCTTGCACCTTAGGTTGCAACGACCAGTCCATCCACTTGTAGGCGCAATTGGGGTGCTTGGCCTCGGCGTGCAGCATGGTGGTGTCGGCCCAGCCGGTCGCGCCCTCCTTGGGAATGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1689861‑1690012‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggtcAATGGCCTCAAGGCCGAGAACCAGCCAGTGGCCTCGACCATTCCCAAGGAGGGCGCGACCGGCTGGGCCGACACCACCATGCTGCACGCCGAGGCCAAGCACCCCAATTGCGCCTACAAGTGGATGGACTGGTCGTTGCAACCTAAG < NC_002947/1690047‑1689901 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |