| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1740480 = | 49 (0.810) | 3 (0.050) | 3/254 | NT | 6.0% | coding (206/384 nt) | PP_1536 | hypothetical protein |
| ? | NC_002947 | 1740523 = | 47 (0.820) | coding (163/384 nt) | PP_1536 | hypothetical protein | |||||
GCATGGCCGAGGGCCTGGCTCTACACCTTGAGCCGCCCCAGTACGGCAACGGCTGGCGCGTGTTCGCCATCTACCGGGGTGAGGCGACTGAGCGCTGTGAGCGGTACAACCCCTGGGAAGCCTGGGCACTGGGTGGACCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1740621‑1740480‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgctCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAGGTGTAGAGCCAGGCCCTCGGCCATGCCGACTGCCCAGCCTAGGGCTTCGCCCGCCAAGTCGCCCGTCTTTAT > NC_002947/1740523‑1740667 GCATGGCCGAGGGGCTGGCTCTACACCTTGAGCCGACCCATTACGGCAACGGCTGGCGCGTGTTCGCCATCTACCGGGGTGAGGCGACTTAGCGCTGTGAGCTGTACAACCCCTGGGAAGCCTGGGCACTGGGTGGAC < 3:144321/138‑1 TGAGCGGTACAACCCCTGGGAAGCCTGGGCACTGGGTGGACCGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAGGTGTAGAGCCAGGCCCTCGGCCATGCCGACT > 1:211317/1‑149 CGGTACAACCCCTGGGAAGCCTGGGCACTGGGTGGACCGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAGGTGTAGAGCCAGGCCCTCGGCCATGCCGACTGCCC > 2:107398/1‑149 GGTACAACCCCTGGGAAGCCTGGGCACTGGGTGGACCGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCGCAAGGTGTAGAGCCAGGCCCTCGGCCATGCCGACTGCC > 3:301162/1‑147 CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAGGTGTAGAGCCAGGCCCTCGGCCATGCCGACTGCCCAGCCTAGGGCTTCGCCCGCCAAGTCGCCCGTCTTTAT > 3:337248/1‑149 GCATGGCCGAGGGCCTGGCTCTACACCTTGAGCCGCCCCAGTACGGCAACGGCTGGCGCGTGTTCGCCATCTACCGGGGTGAGGCGACTGAGCGCTGTGAGCGGTACAACCCCTGGGAAGCCTGGGCACTGGGTGGACCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1740621‑1740480‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgctCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAGGTGTAGAGCCAGGCCCTCGGCCATGCCGACTGCCCAGCCTAGGGCTTCGCCCGCCAAGTCGCCCGTCTTTAT > NC_002947/1740523‑1740667 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |