New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1740480 = | 49 (0.810) | 3 (0.050) | 3/254 | NT | 6.0% | coding (206/384 nt) | PP_1536 | hypothetical protein |
? | NC_002947 | 1740523 = | 47 (0.820) | coding (163/384 nt) | PP_1536 | hypothetical protein |
TATCGCCGAGCCTTGCCCTGACGATCGCGCGCATCGCCGCAACCAAGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAGGTGTAGAGCCAGGCCCTCGGCCATGCCGACTG > NC_002947/1740334‑1740627 | tATCGCCGAGCCTTGCCCTGACGATCGCGCGCATCGCCGCAACCAAGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGc > 7:4193/1‑149 (MQ=255) ataaagacgggcgacttggcgggcgaagccctaggctgggcagtcggcatggccgagggcctggctctacaccttgagccgccccagtacggcaacggctggcgcgtgttcgccatctaccggggtgaggcgactgagcgctgtgAGCg > 3:337248‑M1/146‑149 (MQ=255) tCGCCGAGCCTTGCCCTGACGATCGCGCGCATCGCCGCAACCAAGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCgg < 5:13575/149‑1 (MQ=255) tCGCCGAGCCTTGCCCTGACGATCGCGCGCATCGCCGCAACCAAGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCgg > 6:13575/1‑149 (MQ=255) gCCGAGCCTTGCCCTGACGATCGCGCGCATCGCCGCAACCAAGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGt < 2:39266/148‑1 (MQ=255) gAGCCTTGCCCTGACGATCGCGCGCATCGCCGCAACCAAGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCAc < 8:4193/149‑1 (MQ=255) cTTGCCCTGACGATCGCGCGCATCGCCGCAACCAAGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAg > 1:335708/1‑149 (MQ=255) ttGCCCTGACGATCGCGCGCATCGCCGCAACCAAGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGt > 2:219633/1‑149 (MQ=255) ttGCCCTGACGATCGCGCGCATCGCCGCAACCAAGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGGCCGCTCACGGCGAAAAACGAGTCTGAGTAAAGGCCTCAACCGAGGCGGTATTTCGCTCCCAGCGGGCCAACCAGt > 8:156036/1‑149 (MQ=255) gCCCTGACGATCGCGCGCATCGCCGCAACCAAGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGt < 3:275915/147‑1 (MQ=255) gATCGCGCGCATCGCCGCAACCAAGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCtt > 4:135194/1‑149 (MQ=255) aTCGCCGCAACCAAGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGtt > 2:160496/1‑149 (MQ=255) ccgcAACCAAGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAc < 5:325332/149‑1 (MQ=255) gggcagtcggcatggccgagggcctggctctacaccttgagccgccccagtacggcaacggctggcgcgtgttcgccatctaccggggtgaggcgactgagcgctgtgAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑Cg > 2:107398‑M1/109‑149 (MQ=255) ggcagtcggcatggccgagggcctggctctacaccttgcgccgccccagtacggcaacggctggcgcgtgttcgccatctaccggggtgaggcgactgagcgctgtgAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAc‑c > 3:301162‑M1/108‑147 (MQ=255) aaCCAAGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAggg < 6:335808/138‑1 (MQ=255) aaCCAAGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAggg > 5:335808/1‑138 (MQ=255) agtcggcatggccgagggcctggctctacaccttgagccgccccagtacggcaacggctggcgcgtgttcgccatctaccggggtgaggcgactgagcgctgtgAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTca > 1:211317‑M1/105‑149 (MQ=255) cAAGTGGGTCAATCCATACGCGTCACCCGAAATGTAATCCAGTCCGATAACGGCGAAAAAAGAGTCTGAGTAAAGGCAGAAACCGATGCTGTAGTTAGATACCATAGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTca > 6:109063/1‑148 (MQ=255) cAAGTGGGTCAAGCCATCCGCGTCACCCGCAAAGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGCTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTca > 6:103838/1‑148 (MQ=255) aaGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTcaca < 8:216377/149‑1 (MQ=255) aGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTcacac < 3:39307/149‑2 (MQ=255) aGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAg > 1:333344/1‑149 (MQ=255) aGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGGTGTAC‑CGCTCACAg < 4:240198/149‑1 (MQ=255) gTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAgc < 8:349374/149‑1 (MQ=255) ggTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCt > 6:337255/1‑149 (MQ=255) aaGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGt > 1:238842/1‑149 (MQ=255) aGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTc < 2:335708/149‑1 (MQ=255) gCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCg > 2:214938/1‑149 (MQ=255) cgcgTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCAc < 5:108495/149‑1 (MQ=255) aCCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGtt > 2:126744/1‑114 (MQ=255) aCCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGtt < 1:126744/114‑1 (MQ=255) cccGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTa < 2:66604/149‑1 (MQ=255) cccGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTa < 1:219633/149‑1 (MQ=255) ccGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAg > 4:348523/1‑79 (MQ=255) ccGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAg < 3:348523/79‑1 (MQ=255) gCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGAt > 2:359726/1‑149 (MQ=255) tGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGc > 7:41322/1‑148 (MQ=255) cAGACCGATGACGGCGAAAAACGCGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCTCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGTTGGTTC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACAcgc < 3:308204/149‑1 (MQ=255) tCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACgcgc > 1:181687/1‑148 (MQ=255) cGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTACGCGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCa < 1:92919/149‑1 (MQ=255) cGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAg > 4:100484/1‑149 (MQ=255) cGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑AGCTCACAGCGCTCAGTCGCATCACCCCGGTAGATGGCGAACACTCGCCAg > 7:263908/1‑149 (MQ=255) tCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CTCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCg > 7:99000/1‑149 (MQ=255) cGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTg < 1:359726/149‑1 (MQ=255) aaaCGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACt > 1:162722/1‑149 (MQ=255) cGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTggg < 2:238842/149‑1 (MQ=255) cgTCTGAGTACAGGCCGAAACCGCTGCGGTATTTCGCGACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGGTGTAC‑CGCTCACAGCGCTCAGTCGCCTCCCCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGggc < 7:156036/148‑1 (MQ=255) tGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCt > 5:254708/1‑149 (MQ=255) tGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCt > 4:37248/1‑149 (MQ=255) aaGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAgg < 1:29658/148‑1 (MQ=255) ggCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAGgtgt < 8:41322/149‑1 (MQ=255) cGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAGGTGTaga < 1:214938/149‑1 (MQ=255) ccGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAGGTGTAGAGCCAg < 2:181687/149‑1 (MQ=255) ccGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAGGTGTAGAGCCAg > 4:199304/1‑149 (MQ=255) cGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAGGTGTAGAGCCAgg > 7:315643/1‑149 (MQ=255) ggTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAGGTGTAGAGCCAGGCCCTCg > 4:312810/1‑149 (MQ=255) gTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAGGTGTAGAGCCAGGCCCTCgg < 3:199304/149‑1 (MQ=255) cTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAGGTGTAGAGCCAGGCCCTCGGCCATGCCg < 8:200846/149‑1 (MQ=255) cAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAGGTGTAGAGCCAGGCCCTCGGCCATGCCGACTg > 2:255508/1‑149 (MQ=255) | TATCGCCGAGCCTTGCCCTGACGATCGCGCGCATCGCCGCAACCAAGTGGGTCAAGCCATCCGCGTCACCCGCAATGTCATCCAGTCCGATCACGGCGAAAAACGAGTCTGAGTAAAGGCCGAAACCGATGCGGTATTTCGCTACCAGCGGTCCACCCAGTGCCCAGGCTTCCCAGGGGTTGTAC‑CGCTCACAGCGCTCAGTCGCCTCACCCCGGTAGATGGCGAACACGCGCCAGCCGTTGCCGTACTGGGGCGGCTCAAGGTGTAGAGCCAGGCCCTCGGCCATGCCGACTG > NC_002947/1740334‑1740627 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |