| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1878480 = | 59 (0.980) | 3 (0.050) | 3/256 | NT | 5.4% | coding (602/1221 nt) | PP_1684 | transporter |
| ? | NC_002947 | 1878549 = | 48 (0.830) | coding (671/1221 nt) | PP_1684 | transporter | |||||
CCGCAGCCAGATGCTGGTCAACCAGGTAGGCCAGCAGGTGAACGCCAATGAATACGACCTGGAAGCCACAGACAAAAAAGCCCAGTGCCAGCAACCAGAAGCCGGAGTGCGTGCACGCCTCGCGCAGCGCCTGGCCCAGGGTCTGCTCGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1878632‑1878480‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcacTGGGCTTTTTTGTCTGTGGCTTCCAGGTCGTATTCATTGGCGTTCACCTGCTGGCCTACCTGGTTGACCAGCATCTGGCTGCGGCCACCGGTACGACAGTGCTGGCGCTGGTCGGCCTGTTCAACATCGTCGGTACCTTCACCG > NC_002947/1878549‑1878692 CCGCAGCCAGATGCTGGTCAACCAGGTAGGCCAGCAGGTGAACGCCAATGAATACGACCTGGAAGCCACAGACAAGAAAGCCCAGTGCCAGCAACCAGAAGCCGGAGTGCGTGCACGCCTCGCGCAGCGCCTGGCCCAGGGTCTGCTCG < 7:345435/149‑1CCGCAGCCAGATGCTGGTCAACCAGGTAGGCCAGCAGGTGAACGCCAATGAATACGACCTGGAAGCCACAGACAAAAAAGCCCAGTGCCAGCAACCAGAAGCCGGAGTGCGTGCACGCCTCGCGCAGCGCCTGGCCCAGGGTCTGCTCG < 5:351964/149‑1 GCAGCCAGATGCTGGTCAACCAGGTAGGCCAGCAGGTGAACGCCAATGAATACGACCTGGAAGCCACAGACAAAAAAGCCCAGTGCCAGCAACCAGAAGCCGGAGTGCGTGCACGCCTCGCGCAGCGCCTGGCCCAGGGTCTGCTCGGa > 5:10801/1‑148 GCAGCCAGATGCTGGTCAACCAGGTAGGCCAGCAGGTGAACGCCAATGAATACGACCTGGAAGCCACAGACAAAAAAGCCCAGTGCCAGCAACCAGAAGCCGGAGTGCGTGCACGCCTCGCGCAGCGCCTGGCCCAGGGTCTGCTCGG > 3:156986/1‑148 AGCCAGATGCTGGTCAACCAGGTAGGCCAGCAGGTGAACGCCAATGAATACGACCTGGAAGCCACAGACAAAAAAGCCCAGTGCCAGCAACCAGAAGCCGGAGTGCGTGCACGCCTCGCGCAGCGCCTGGCCCAGGGTCTGCTCGGCAC > 1:237140/1‑149 AAAAGCCCAGTGCCAGCAACCAGAAGCCGGAGTGCGTGCACGCCTCGCGCAGCGCCTGGCCCAGGGTCTGCTCGGCACTGGGCTTTTTTGTCTGTGGCTTCCAGGTCGTATTCATTGGCGTTCACCTGCTGGCCTACCTGGTTGACCAG > 3:347804/1‑149 CCAGTGCCAGCAACCAGAAGCCGGAGTGCGTGCACGCCTCGCGCAGCGCCTGGCCCAGGGTCTGCTCGGCACTGGGCTTTTTTGTCTGTGGCTTCCAGGTCGTATTCATTGGCGTTCACCTGCTGGCCTACCTGGTTGACCAGCATCTG > 3:131643/1‑149 CCTCGCGCAGCGCCTGGCCCAGGGTCTGCTCGGCACTGGGCTTTTTTGTCTGTGGCTTCCAGGTCGTATTCATTGGCGTTCACCTGCTGGCCTACCTGGTTGACCAGCATCTGGCTGCGGCCACCGGTACGACAGTGCTGGCGCTGGTC < 4:131643/149‑1 GGCACTGGGCTTTTTTGTCTGTGGCTTCCAGGTCGTATTCATTGGCGTTCACCTGCTGGCCTACCTGGTTGACCAGCATCTGGCTGCGGCCACCGGTACGACAGTGCTGGCGCTGGTCGGCCTGTTCAACATCGTCGGTACCTTCACCG > 8:179793/1‑149 CACTGGGCTTTTTTGTCTGTGGCTTCCAGGTCGTATTCATTGGCGTTCACCTGCTGGCCTACCTGGTTGACCAGCATCTGGCTGCGGCCACCGGTACGACAGTGCTGGCGCTGGTCGGCCTGTTC < 1:115688/125‑1 CACTGGGCTTTTTTGTCTGTGGCTTCCAGGTCGTATTCATTGGCGTTCACCTGCTGGCCTACCTGGTTGACCAGCATCTGGCTGCGGCCACCGGTACGACAGTGCTGGCGCTGGTCGGCCTGTTC > 2:115688/1‑125 CCGCAGCCAGATGCTGGTCAACCAGGTAGGCCAGCAGGTGAACGCCAATGAATACGACCTGGAAGCCACAGACAAAAAAGCCCAGTGCCAGCAACCAGAAGCCGGAGTGCGTGCACGCCTCGCGCAGCGCCTGGCCCAGGGTCTGCTCGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1878632‑1878480‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcacTGGGCTTTTTTGTCTGTGGCTTCCAGGTCGTATTCATTGGCGTTCACCTGCTGGCCTACCTGGTTGACCAGCATCTGGCTGCGGCCACCGGTACGACAGTGCTGGCGCTGGTCGGCCTGTTCAACATCGTCGGTACCTTCACCG > NC_002947/1878549‑1878692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |