New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2098428	58 (0.960)	4 (0.070)	4/238	NT	6.5%	coding (1462/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 2098449	63 (1.170)					coding (1441/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator

ATGCAAGGGCGCTGGCGGGATGGCTTCGGTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2098276‑2098428 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaggccggtgccGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGCCTGGCTTTGACGCGTAACCTGTGCAAGGCCATGCAGGGCCACCTGCACATTCGCTCCGAGCCGGGCTTTGGCAGCTGTTTTACCGCCGAATTGCCGCTGACCGTGCACACC  <  NC_002947/2098449‑2098303                                                                                                                                                                                                                                                                                                              ATGCAAGGGCGCTGGCGGGATGGCTTCGGTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGG                                                                                                                                                         >  2:273763/1‑149     AAGGGCGCTGGCGGGATGGCTTCGGTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCC                                                                                                                                                     >  4:10063/1‑149     AAGGGCGCTGGCGGGATGGCTTCGGTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCC                                                                                                                                                     <  5:255817/149‑1     AAGGGCGCTGGCGGGATGGCTTCGGTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTG                                                                                                                                                       >  7:297980/1‑147     AAGGGCGCTGGCGGGATGGCTTCGGTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTG                                                                                                                                                       <  8:297980/147‑1                   GATGGCTTCGGTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGC                                                                                                                                                            <  7:316865/128‑1                   GATGGCTTCGGTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGC                                                                                                                                                            >  8:316865/1‑128                                     GGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCT                                                                                                                     <  2:240153/149‑1                                             GCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGACCCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGCCTGG                                                                                                             <  7:92923/149‑1                                                                                             GCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGG                                                                                                                        <  7:170423/90‑1                                                                                             GCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGG                                                                                                                        >  8:170423/1‑90                                                                                                                                                      TGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGCCTGGCTTTGACGCGTAACCTGTGCAAGGCCATGCAGGGCCACCTGCACATTCGCTCCGAGCCGGGCTTTGGCAGCTGTTTTACCGCCGAATTGCCGCTGACCGTGCACA    <  1:192838/149‑1                                                                                                                                                         CGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGCCTGGCTTTGACGCGTAACCTGTGCAAGGCCATGCAGGGCCACCTGCACATTCGCTCCGAGCCGGGCTTTGGCGGCTGTTTTACCGCCGAATTGCCGCTGACCGTGCACACC  >  5:366666/1‑148                                                                                                                                                         CGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGCCTGGCTTTGACGCGTAACCTGTGCAAGGCCATGCAGGGCCACCTGCACATTCGCTCCGAGCCGGGCTTTGGCAGCTGTTTTACCGCCGAATTGCCGCTGACCGTGCACACC  >  3:27338/1‑148                                                                                                                                                                                                                                                                                                              ATGCAAGGGCGCTGGCGGGATGGCTTCGGTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAAGCCAGGCCCAGGCCGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2098276‑2098428 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaggccggtgccGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGCCTGGCTTTGACGCGTAACCTGTGCAAGGCCATGCAGGGCCACCTGCACATTCGCTCCGAGCCGGGCTTTGGCAGCTGTTTTACCGCCGAATTGCCGCTGACCGTGCACACC  <  NC_002947/2098449‑2098303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.