New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2098428	58 (0.960)	4 (0.070)	4/238	NT	6.5%	coding (1462/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 2098449	63 (1.170)					coding (1441/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator

AAGGGCGCTGGCGGGATGGCTTCGGTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCC  >  NC_002947/2098280‑2098575                                                                                                                                                      |                                                                                                                                                    aaGGGCGCTGGCGGGATGGCTTCGGTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCC                                                                                                                                                     <  5:255817‑M1/149‑1 (MQ=255) aaGGGCGCTGGCGGGATGGCTTCGGTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCC                                                                                                                                                     >  4:10063‑M1/1‑149 (MQ=255)           gCGGGATGGCTTCGGTGTGCACGGTCAGCGTCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTgg                                                                                                                                           <  5:155777/149‑1 (MQ=255)           gCGGGATGGCTTCGGTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTgg                                                                                                                                           >  3:92766/1‑149 (MQ=255)                 tGGCTTCGGTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTg                                                                                                                                     <  2:331048/149‑1 (MQ=255)                     ttCGGTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGc                                                                                                                                 >  3:78873/1‑149 (MQ=255)                        ggTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCg                                                                                                                               >  3:27338‑M2/1‑147 (MQ=255)                        ggTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCCGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCg                                                                                                                               >  5:366666‑M2/1‑147 (MQ=255)                          tgtgCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCggca                                                                                                                            <  1:192838‑M2/149‑5 (MQ=255)                                 ggTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCggcatcacccgccagtacggtggcaccggcct                                                                                                                     <  2:240153‑M1/149‑33 (MQ=255)                                       cGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTg                                                                                                                >  2:240988/1‑148 (MQ=255)                                        ggCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTg                                                                                                                >  1:3446/1‑147 (MQ=255)                                         gCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGACCCAGGCCGGTGCCggcatcacccgccagtacggtggcaccggcctgggcctgg                                                                                                             <  7:92923‑M1/149‑41 (MQ=255)                                              tCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTg                                                                                                        >  4:118481/1‑149 (MQ=255)                                                 gcggTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGaa                                                                                                     <  2:313561/149‑1 (MQ=255)                                                   ggTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGCCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTgg                                                                                                       >  1:246889/1‑145 (MQ=255)                                                               gCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTggg                                                                                       >  1:185617/1‑149 (MQ=255)                                                                ccAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTgg                                                                                        >  5:313832/1‑147 (MQ=255)                                                                ccAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTgg                                                                                        <  6:313832/147‑1 (MQ=255)                                                                ccAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGc                                                                                      >  5:89335/1‑149 (MQ=255)                                                                      cccGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTc                                                                                >  4:47616/1‑149 (MQ=255)                                                                       ccGGCTCGCAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGATACGCGTCAA‑ATCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCg                                                                               <  8:334162/149‑1 (MQ=255)                                                                        cGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCgg                                                                              <  1:240988/149‑1 (MQ=255)                                                                         ggCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCggg                                                                             <  2:192838/149‑1 (MQ=255)                                                                         ggCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCggg                                                                             <  3:10063/149‑1 (MQ=255)                                                                           cTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGga                                                                           >  8:261172/1‑149 (MQ=255)                                                                              ggAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGgatgc                                                                        >  3:145864/1‑149 (MQ=255)                                                                                aGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGgatgcc                                                                       >  6:367716/1‑148 (MQ=255)                                                                                 gCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGgatgccga                                                                     <  7:261172/149‑1 (MQ=255)                                                                                   gAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAAGAGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGgatgccgat                                                                    >  1:270010/1‑149 (MQ=255)                                                                                   gAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGGAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGgatgccgatg                                                                   >  1:207739/1‑149 (MQ=255)                                                                                   gAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGgatgccgat                                                                    <  2:185617/148‑1 (MQ=255)                                                                                         gCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCggcatcacccgccagtacggtggcaccgg                                                                                                                        <  7:170423‑M1/90‑30 (MQ=255)                                                                                         gCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCggcatcacccgccagtacggtggcaccgg                                                                                                                        >  8:170423‑M1/1‑61 (MQ=255)                                                                                         gCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTa                                                             >  5:295840/1‑149 (MQ=255)                                                                                          cAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTa                                                             <  6:89335/148‑1 (MQ=255)                                                                                            ggTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATcc                                                          <  5:367716/149‑1 (MQ=255)                                                                                             gTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATccc                                                         <  7:162394/149‑1 (MQ=255)                                                                                             gTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATccc                                                         >  4:199513/1‑149 (MQ=255)                                                                                                  ccTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTACGGGGATGCCGATGCCGGTATCCCGTAcc                                                    >  3:168773/1‑149 (MQ=255)                                                                                                  ccTGCAT‑GCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCt                                                   >  4:191557/1‑149 (MQ=255)                                                                                                   cTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGG‑TGCCGATGCCGGTATCCCGTACCTc                                                  >  6:214539/1‑149 (MQ=255)                                                                                                    tGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTc                                                  >  8:310306/1‑149 (MQ=255)                                                                                                       aTGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTc                                                  >  5:46626/1‑146 (MQ=255)                                                                                                           ccTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGc                                           >  1:64541/1‑149 (MQ=255)                                                                                                               gCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGcaca                                        <  3:118481/148‑1 (MQ=255)                                                                                                                 acaGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCAcacca                                     >  2:352064/1‑149 (MQ=255)                                                                                                                     gTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGa                                 <  2:270010/149‑1 (MQ=255)                                                                                                                          gcgTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATg                            <  7:255253/149‑1 (MQ=255)                                                                                                                          gcgTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTACGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATg                            <  4:168773/149‑1 (MQ=255)                                                                                                                            gTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGgc                          >  8:332688/1‑149 (MQ=255)                                                                                                                             tCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGgcc                         >  2:338009/1‑149 (MQ=255)                                                                                                                             tCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGgcc                         >  2:343442/1‑149 (MQ=255)                                                                                                                               aa‑aGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGgccgc                       >  4:181127/1‑149 (MQ=255)                                                                                                                                   gCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGgccgcc                      >  7:112092/1‑147 (MQ=255)                                                                                                                                    ccaggcccaggcCGGTGCCACCGTACTGGTGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATggacaacgg                    >  7:94062/1‑141 (MQ=255)                                                                                                                                    ccaggcccaggcCGGTGCCACCGTACTGGCGGGTGATGCCggcaccggcctgggtctggctttgacgcgtaacctgtgcaaggccatgcagggccacctgcacattcgctccgagccgggctttggcagctgttttaccgccgaattgc                   <  7:92923‑M2/149‑110 (MQ=255)                                                                                                                                    ccaggcccaggcCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAg                   >  4:340450/1‑149 (MQ=255)                                                                                                                                    ccaggcccaggcCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAg                   <  1:273763/149‑1 (MQ=255)                                                                                                                                      aggcccaggccGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAgcg                 >  1:297484/1‑149 (MQ=255)                                                                                                                                          ccaggccGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACg             >  3:312325/1‑149 (MQ=255)                                                                                                                                          ccaggccGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACg             >  1:149670/1‑149 (MQ=255)                                                                                                                                           caggccGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGt            <  1:343442/149‑1 (MQ=255)                                                                                                                                           caggccGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGt            <  1:338009/149‑1 (MQ=255)                                                                                                                                            aggccGGTGCCACCGTACTGGCGGGTGATGCCggcaccggcctgggcctggctttgacgcgtaacctgtgcaaggccatgcagggccacctgcacattcgctccgagccgggctttggcagctgttttaccgccgaattgccgctgacc           <  2:240153‑M2/149‑118 (MQ=255)                                                                                                                                            aggccGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTc           <  6:46626/149‑1 (MQ=255)                                                                                                                                              gccGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGa         >  3:139230/1‑149 (MQ=255)                                                                                                                                               ccGGTGCCACCGTACTGGCGGGTGATGCCggcaccggcctgggcctggctttgacgcgtaacctgtgcaaggccatgcagggccacctgc                                                                   <  7:170423‑M2/90‑62 (MQ=255)                                                                                                                                               ccGGTGCCACCGTACTGGCGGGTGATGCCggcaccggcctgggcctggctttgacgcgtaacctgtgcaaggccatgcagggccacctgc                                                                   >  8:170423‑M2/1‑29 (MQ=255)                                                                                                                                               ccGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGAc        <  3:191557/149‑1 (MQ=255)                                                                                                                                                cGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGAcg       >  6:241001/1‑149 (MQ=255)                                                                                                                                                   tGCCggcatcacccgccagtacggtggcaccggcctgggcctggctttgacgcgtaacctgtgcaaggccatgcagggccacctgcacattcgctccgagccgggctttggcagctgttttaccgccgaattgccgctgaccgtgcaca    <  1:192838‑M1/149‑146 (MQ=255)                                                                                                                                                    gCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGc   >  8:65353/1‑149 (MQ=255)                                                                                                                                                      cggcatcacccgccagtacggtggcaccggcctgggcctggctttgacgcgtaacctgtgcaaggccatgcagggccacctgcacattcgctccgagccgggctttggcggctgttttaccgccgaattgccgctgaccgtgcacacc  >  5:366666‑M1/1‑1 (MQ=255)                                                                                                                                                      cggcatcacccgccagtacggtggcaccggcctgggcctggctttgacgcgtaacctgtgcaaggccatgcagggccacctgcacattcgctccgagccgggctttggcagctgttttaccgccgaattgccgctgaccgtgcacacc  >  3:27338‑M1/1‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                    AAGGGCGCTGGCGGGATGGCTTCGGTGTGCACGGTCAGCGGCAATTCGGCGGTAAAACAGCTGCCAAAGCCCGGCTCGGAGCGAATGTGCAGGTGGCCCTGCATGGCCTTGCACAGGTTACGCGTCAA‑AGCCAGGCCCAGGCCGGTGCCACCGTACTGGCGGGTGATGCCGGCACCGGCCTGGGTGAAGGGCTGGAAGATGCGCGCCTGGGCGTCTTCGGGGATGCCGATGCCGGTATCCCGTACCTCCAGACGCACACCACCGACAATGGCCGCCAAGCGCACGTCGACGCGGCC  >  NC_002947/2098280‑2098575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.