| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2303706 = | 39 (0.650) | 3 (0.050) | 3/254 | NT | 6.5% | coding (1136/1632 nt) | PP_2027 | hypothetical protein |
| ? | NC_002947 | 2303772 = | 49 (0.850) | coding (1070/1632 nt) | PP_2027 | hypothetical protein | |||||
GCGCAACGAAATCAGCGAACGGGGCATGACCGCCAACCGCGAAGAGCGCGAGGCCCTGGTGCCGACCCACAGCGGCACGCTGGCGTTGCCGGCGCTGGAAGTGGCCTGGTGGAACACCCGCGAAGACCACCTGGAGCACAGCAGCCTGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2303858‑2303706‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcAACGCCAGCGTGCCGCTGTGGGTCGGCACCAGGGCCTCGCGCTCTTCGCGGTTGGCGGTCATGCCCCGTTCGCTGATTTCGTTGCGCAGCAGCGGCTGGTCAGGGTAACGGCGCAGGCCGATGATCTCCGTAGCCGGCAGCGGCGGCA > NC_002947/2303772‑2303919 GCGCAACGAAATCAGCGAACGGGGCATGACCGCCAACCGCGAAGAGCGCGAGGCCCTGGTGCCGACCCACAGCGGCACGCTGGCGTTGCCGGCGCTGGAAGTGGCCTGGTGGAACACCCGCGAAGACCACCTGGAGCACAGCAGCCTGC > 6:305019/1‑149GCGCAACGAAATCAGCGAACGGGGCATGACCGCCAACCGCGAAGAGCGCGAGGCCCTGGTGCCGACCCACAGCGGCACGCTGGCGTTGCCGGCGCTGGAAGTGGCCTGGTGGAACACCCGCGAAGACCACCTGGAGCACAGCAGCCTGC > 8:316957/1‑149 GTTGCCGGCGCTGGAAGTGGCCTGGTGGAACACCCGCGAAGACCACCTGGAGCACAGCAGCCTGCCGGCAACGCCAGCGTGCCGCTGTGGGTCGGCACCAGGGCCTCGCGCTCTTCGCGGTTGGCGGTCATGCCCCGTTCGCTGATTTC > 4:151346/1‑149 TTGCCGGCGCTGGAAGTGGCCTGGTGGAACACCCGCGAAGACCACCTGGAGCACAGCAGCCTGCCGGCAACGCCAGCGTGCCGCTGTGGGTCGGCACCAGGGCCTCGCG > 8:178818/1‑109 GTGGAACACCCGCGAAGACCACCTGGAGCACAGCAGCCTGCCGGCAACGCCAGCGTGCCGCTGTGGGTCGGCACCAGGGCCTCGCGCTCTTCGCGGTTGGCGGTCATGCCCCGTTCGCTGATTTCGTTGCGCAGCAGCGGCTGGTCAGG < 3:151346/149‑1 CCGGCAACGCCAGCGTGCCGCTGTGGGTCGGCACCAGGGCCTCGCGCTCTTCGCGGTTGGCGGTCATGCCCCGTTCGCTGATTTCGTTGCGCAGCAGCGGCTGGTCAGGGTAACGGCGCAGGCCGATGATCTCCGTAGCCGGCAGCGGC > 3:296788/1‑149 CAACGCCAGCGTGCCGCTGTGGGTCGGCACCAGGGCCTCGCGCTCTTCGCGGTTGGCGGTCATGCCCCGTTCGCTGATTTCGTTGCGCAGCAGCGGCTGGTCAGGGTAACGGCGCAGGCCGATGATCTCCGTAGCCGGCAGCGGCGG > 4:356958/1‑147 CAACGCCAGCGTGCCGCTGTGGGTCGGCACCAGGGCCTCGCGCTCTTCGCGGTTGGCGGTCATGCCCCGTTCGCTGATTTCGTTGCGCAGCAGCGGCTGGTCAGGGTAACGGCGCAGGCCGATGATCTCCGTAGCCGGCAGCGGCGG > 6:195890/1‑147 CAACGCCAGCGTGCCGCTGTGGGTCGGCACCAGGGCCTCGCGCTCTTCGCGGTCGGCGGTCATGCCCCGTTCGCTGATTTCGTTGCGCAGCAGCGGCTGGTCAGGGTAACGGCGCAGGCCGATGATCTCCGTAGCCGGCAGCGGCGGCA < 6:22380/149‑1 GCGCAACGAAATCAGCGAACGGGGCATGACCGCCAACCGCGAAGAGCGCGAGGCCCTGGTGCCGACCCACAGCGGCACGCTGGCGTTGCCGGCGCTGGAAGTGGCCTGGTGGAACACCCGCGAAGACCACCTGGAGCACAGCAGCCTGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2303858‑2303706‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcAACGCCAGCGTGCCGCTGTGGGTCGGCACCAGGGCCTCGCGCTCTTCGCGGTTGGCGGTCATGCCCCGTTCGCTGATTTCGTTGCGCAGCAGCGGCTGGTCAGGGTAACGGCGCAGGCCGATGATCTCCGTAGCCGGCAGCGGCGGCA > NC_002947/2303772‑2303919 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |