New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2342349 =	53 (0.880)	4 (0.070)	4/252	NT	8.0%	coding (201/1254 nt)	PP_2058	porin
	?	NC_002947	2342442 =	42 (0.740)					coding (294/1254 nt)	PP_2058	porin

GCGCGACCATCGTCATGCACCGGCAACAGTCCGGTGCCGCTGCGCCCACGGCCGGAGTCAAGGCGTACGCCCAGCAGGCCCATGGCGTCGACGCCCAAGCCCAGGGTGCCTTGGGTAAAACCCGACTGGTAGTCGAGCAGAAAGCCTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2342498‑2342349 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccttgaCTCCGGCCGTGGGCGCAGCGGCACCGGACTGTTGCCGGTGCATGACGATGGTCGCGCGGCCGACGAATTCGCCAGCGCCGGTATCACGGCCAAAGCCCGCCTGGGCAGCACCGTGGTCAAGCATGGCACCTTGCTGCCCAAGAC  >  NC_002947/2342442‑2342585                                                                                                                                                                                                                                                                                                        GCGCGACCATCGTCATGCACCGGCAACAGTCCGGTGCCGCTGCGCCCACGGCCGGAGTCAAGGCGTACGCCCAGCAGGCCCATGGCGTCGACGCCCAAGCCCAGGGTGCCTTGGGTAAAACCCGACTGGTAGTCGAGCAGAAAGCCTT                                                                                                                                                    >  2:265220/1‑148                                                       GAGTCAAGGCGTACGCCCAGCAGGCCCATGGCGTCGACGCCCAAGCCCAGGGTGCCTTGGGTAAAACCCGACTGGTAGTCGAGCAGAAAGCCTTGACTCCGGCCGTGGGCGCAGCGGCACCGGACTGTTGCCGGTGCATGACGATGGTC                                                                                             >  1:113475/1‑149                                                            AAGGCGTACGCCCAGCAGGCCCATGGCGTCGACGCCCAAGCCCAGGGTGCCTTGGGTAAAACCCGACTGGTAGTCGAGCAGAAAGCCTTGACTCCGGCCGTGGGCGCAGCGGCACCGGACTGTTGCCGGTGCATGACGATGGTC                                                                                             <  3:139950/144‑1                                                            AAGGCGTACGCCCAGCAGGCCCATGGCGTCGACGCCCAAGCCCAGGGTGCCTTGGGTAAAACCCGACTGGTAGTCGAGCAGAAAGCCTTGACTCCGGCCGTGGGCGCAGCGGCACCGGACTGTTGCCGGTGCATGACGATGGTC                                                                                             >  4:139950/1‑144                                                                                                 AAGCCCAGGGTGCCTTGGGTAAAACCCGACTGGTAGTCGAGCAGAAAGCCTTGACTCCGGCCGTGGGCGCAGCGGCACCGGACTGTTGCCGGTGCATGACGATGGTCGCGCGGCCGACGAATTCGCCAGCGCCGGTATCACGGCCAAAG                                                   <  2:113475/149‑1                                                                                                                                                gaCTTGACTCCGGCCGTGGGCGCAGCGGCACCGGACTGTTGCCGGTGCATGACGATGGTCGCGCGGCCGACGAATTCGCCAGCGCCGGTATCACGGCCAAAGCCCGCCTGGGCAGCACCGTGGTCAAGCATGGCACCTTGCTGCCC       >  4:155839/3‑146                                                                                                                                                  CTTGACTCCGGCCGTGGGCGCAGCGGCACCGGACTGTTGCCGGTGCATGACGATGGTCGCGCGGCCGACGAATTCGCCAGCGCCGGTATCACGGCCAAAGCCCGCCTGGGCAGCACCGTGGTCAAGCATGGCACCTTGCTGCCCAAGAC  >  1:249773/1‑149                                                                                                                                                                                                                                                                                                        GCGCGACCATCGTCATGCACCGGCAACAGTCCGGTGCCGCTGCGCCCACGGCCGGAGTCAAGGCGTACGCCCAGCAGGCCCATGGCGTCGACGCCCAAGCCCAGGGTGCCTTGGGTAAAACCCGACTGGTAGTCGAGCAGAAAGCCTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2342498‑2342349 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccttgaCTCCGGCCGTGGGCGCAGCGGCACCGGACTGTTGCCGGTGCATGACGATGGTCGCGCGGCCGACGAATTCGCCAGCGCCGGTATCACGGCCAAAGCCCGCCTGGGCAGCACCGTGGTCAAGCATGGCACCTTGCTGCCCAAGAC  >  NC_002947/2342442‑2342585

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.