| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2488022 | 37 (0.620) | 3 (0.050) | 3/256 | NT | 7.8% | coding (394/516 nt) | PP_2182 | hypothetical protein |
| ? | NC_002947 | = 2488049 | 35 (0.600) | coding (421/516 nt) | PP_2182 | hypothetical protein | |||||
GCTGCTTGGGTTGACCCGCGAACAGCTCAAGCTGGGCATTTCCACGTGGTGCCGGGGCGCTCGATACTGGGCGAGCATGGTGGAGAATGCACCGCGCCTTGACCTGAATGGGCAGGCCGCAGGTACTGTGACCGCCGCTCAGGCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2487874‑2488022‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcGTTGCCGCGCAGCCTGCTGCTTGGCATGCAGCGCCTGAGCGGCGGTCACAGTACCTGCGGCCTGCCCATTCAGGTCAAGGCGCGGTGCATTCTCCACCATGCTCGCCCAGTATCGAGCGCCCCGGCACCACGTGGAAATGCCCAGCTT < NC_002947/2488049‑2487902 GCTGCTTGGGTTGACCCGCGAACAGCTCAAGCTGGGCATTTCCACGTGGTGCCGGGGCGCTCGATACTGGGCGAGCATGGTGGAGAATGCACCGCGCCTTGACCTGTATGGGCAGGCCGCAGGTACTGTGACCGCCGCTCAGGCGCTGC < 6:222894/149‑1GCTGCTTGGGTTGACCCGCGAACAGCTCAAGCTGGGCATTTCCACGTGGTGCCGGGGCGCTCGATACTGGGCGAGCATGGTGGAGAATGCACCGCGCCTTGACCTGAATGGGCAGGCCGCAGGTACTGTGACCGCCGCTCAGGCGCTGC < 6:74113/149‑1 GGCATTTCCACGTGTTGCCGGGGCGCTCGATACTGGGCGAGCATGGTGGAGAATGCACCGCGCCTTGACCTGAATGGGCAGGCCGCAGGTACTGTGACCGCCGCTCAGGCGCTGCGGTGCCGCGCAGCCTGCTGCTTGGCATGCAGCGC < 2:17896/149‑1 GGCATTTCCACGTGGTGCCGGGGCGCTCGATACTGGGCGAGCATGGTGGAGAATGCACCGCGCCTTGACCTGAATGGGCAGGCCGCAGGTACTGTGACCGCCGCTCAGGCGCTGCGTTGCCGCGCAGCCTGCTGCTTGGCATGCAGC < 6:139458/147‑1 GCATTTCCACGTGGTGCCGGGGCGCTCGATACTGGGCGAGCATGGTGGAGAATGCACCGCGCCTTGACCTGAATGGGCAGGCCGCAGGTACTGTGACCGCCGCTCAGGCGCTGCGTTGCCGCGCAGCCTGCTGCTTGGCATGCAGCGCC < 5:233024/149‑1 TGCGTTGCCGCGCAGCCTGCTGCTTGGCATGCAGCGCCTGAGCGGCGGTCACAGTACCTGCGGCCTGCCCATTCAGGTCAAGGCGCGGTGCATTCTCCACCATGCTCGCCCAGTATCGAGCGCCCCGGCACCACGTGGAAATGCCCAGC > 8:133620/1‑149 CGTTGCCGCGCAGCCTGCTGCTTGGCATGCAGCGCCTGAGCGGCGGTCACAGTACCTGCGGCCTGCCCATTCAGGTCAAGGCGCGGTGCATTCTCCACCATGCTCGCCCAGTATCGAGCGCCCCGGCACCACGTGGAAATGCCCAGCTT < 7:60395/149‑1 CGTTGCCGCGCAGCCTGCTGCTTGGCATGCAGCGCCTGAGCGGCGGTCACAGTACCTGCGGCCTGCCCATTCAGGTCAAGGCGCGGTGCATTCTCCACCATGCTCGCCCAGTATCGAGCGCCCCGGCACCACGTGGAAATGCCCAGC < 1:114374/147‑1 CGTTGCCGCGCAGCCTGCTGCTTGGCATGCAGCGCCTGAGCGGCGGTCACAGTACCTGCGGCCTGCCCATTCAGGTCAAGGCGCGGTGCATTCTCCACCATGCTCGCCCAGTATCGAGCGCCCCGGCACCACGTGGAAATGCCCAGC < 7:256870/147‑1 GCTGCTTGGGTTGACCCGCGAACAGCTCAAGCTGGGCATTTCCACGTGGTGCCGGGGCGCTCGATACTGGGCGAGCATGGTGGAGAATGCACCGCGCCTTGACCTGAATGGGCAGGCCGCAGGTACTGTGACCGCCGCTCAGGCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2487874‑2488022‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcGTTGCCGCGCAGCCTGCTGCTTGGCATGCAGCGCCTGAGCGGCGGTCACAGTACCTGCGGCCTGCCCATTCAGGTCAAGGCGCGGTGCATTCTCCACCATGCTCGCCCAGTATCGAGCGCCCCGGCACCACGTGGAAATGCCCAGCTT < NC_002947/2488049‑2487902 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |