| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2775292 | 51 (0.850) | 4 (0.070) | 4/250 | NT | 6.8% | coding (220/1353 nt) | PP_5521 | hypothetical protein |
| ? | NC_002947 | = 2775325 | 62 (1.100) | coding (187/1353 nt) | PP_5521 | hypothetical protein | |||||
TAAGGCATGCCGATGCGGGCCAGCAGGCTGCCATCTTCCAGCAGCAGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2775141‑2775292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tc‑‑‑‑‑‑‑‑gacgccTGGCTGTCAGCCCTGCAGGCAGCCAACCGTCCTGGCGTCGACGAACAGCAGCGCCAGGCATTCCGCAAGGCCTGGCCACCCGCACACCACCCCTTGATACCGTTGCTCGAAGACCACGGCCAAGGCATCAGCCATGTCCTGCTGCTG < NC_002947/2775325‑2775179 TAAGGCATGCCGATGCGGGCCAGCAGGCTGCCATCTTCCAGCAGCAGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GAC > 8:153959/1‑149 AAGGCATGCCGATGCGGGCCAGCAGGCTGCCATCTTCCAGCAGCAGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACG > 5:87159/1‑149 AGCAGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCTGGCTGTCAGCCCTGCAGGCAGCCAACCGTCCTGGCGTC > 2:362914/1‑149 CAGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGTCTGGCTGTCAGCCCTGCAGGCAGCCAACCGTCCTGGCGTCGA < 5:45098/149‑1 AGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTCGACGCCAGGACGCCTGGCTGTCAGCCCTGCAGGCAGCCAACCGTCCTG < 3:105379/149‑1 CATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCTGGCTGTCAGCCCTGCAGGCAGCCAACCGTCCTGGCGTCGACGAAC < 1:362914/149‑1 TC‑‑‑‑‑‑‑‑GACGCCTGGCTGTCAGCCCTGCAGGCAGCCAACCGTCCTGGCGTCGACGAACAGCAGCGCCAGGCATTCCGCAAGGCCTGGCCACCCGCACACCACCCCTTGATACCGTTGCTCGAAGACCACGGCCAAGGCATCAGCCATGTCCTG > 7:153959/1‑149 GACGCCTGGCTGTCAGCCCTGCAGGCAGCCAACCGTCCTGGCGTCGACGAACAGCAGCGCCAGGCATTCCGCAAGGCCTGGCCACCCGCACACCACCCCTTGATACCGTTGCTCGAAGACCACGGCCAAGGCATCAGCCATGTCCTGC < 4:283695/148‑1 CCTGGCTGTCAGCCCTGCAGGCAGCCAACCGTCCTGGCGTCGACGAACAGCAGCGCCAGGCATTCCGCAAGGCCTGGCCACCCGCACACCACCCCTTGATACCGTTGCTCGAAGACCACGGCCAAGGCATCAGCCATGTCCTGCTGCTG < 6:72996/149‑1 CTGGCTGTCAGCCCTGCAGGCAGCCAACCGTCCTGGCGTCGACGAACAGCAGCGCCAGGCATTCCGCAAGGCCTGGCCACCCGCACACCACCCCTTGATACCGTTGCTCGAAGACCACGGCCAAGGCATCAGCCATGTCCTGCTGCTG > 6:194981/1‑148 TAAGGCATGCCGATGCGGGCCAGCAGGCTGCCATCTTCCAGCAGCAGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2775141‑2775292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tc‑‑‑‑‑‑‑‑gacgccTGGCTGTCAGCCCTGCAGGCAGCCAACCGTCCTGGCGTCGACGAACAGCAGCGCCAGGCATTCCGCAAGGCCTGGCCACCCGCACACCACCCCTTGATACCGTTGCTCGAAGACCACGGCCAAGGCATCAGCCATGTCCTGCTGCTG < NC_002947/2775325‑2775179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |