New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2775292	51 (0.850)	4 (0.070)	4/250	NT	6.8%	coding (220/1353 nt)	PP_5521	hypothetical protein
	?	NC_002947	= 2775325	62 (1.100)					coding (187/1353 nt)	PP_5521	hypothetical protein

GCATGCCGATGCGGGCCAGCAGGCTGCCATCTTCCAGCAGCAGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCC  >  NC_002947/2775145‑2775440                                                                                                                                                            |                                                                                                                                                     gCATGCCGATGCGGGCCAGCAGGCTGCCATCTTCCAGCAGCAGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCa                                                                                                                                                     <  8:316701/149‑1 (MQ=255)     gCCGATGCGGGCCAGCAGGCTGCCATCTTCCAGCAGCAGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGAc                                                                                                                                                 >  8:54497/1‑149 (MQ=255)     gCCGATGCGGGCCAGCAGGCTGCCATCTTCCAGCAGCAGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGAc                                                                                                                                                 >  5:194981/1‑149 (MQ=255)            cGGGCCAGCAGGCTGCCATCTTCCAGCAGCAGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTgg                                                                                                                                           <  6:87159/148‑1 (MQ=255)             gggCCAGCAGGCTGCCATCTTCCAGCAGCAGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGct                                                                                                                                         >  3:189422/1‑149 (MQ=255)                ccAGCAGGCTGCCATCTTCCAGCAGCAGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGctgcc                                                                                                                                      >  7:33208/1‑149 (MQ=255)                         tGCCATCTTCCAGCAGCAGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCt                                                                                                                             >  4:180794/1‑149 (MQ=255)                           ccATCTTCCAGCAGCAGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCt                                                                                                                             <  4:11890/147‑1 (MQ=255)                                   cagcagcagGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAgg                                                                                                                   <  6:72996‑M2/149‑3 (MQ=255)                                   cagcagcagGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAg                                                                                                                    >  6:194981‑M2/1‑147 (MQ=255)                                       agcagGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCtggctgtcagccctgcaggcagccaaccgtcctggcgtc                                                                                                               >  2:362914‑M1/1‑110 (MQ=255)                                        gcagGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAggcgtc                                                                                                               <  4:283695‑M2/148‑7 (MQ=255)                                         cagGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGTCtggctgtcagccctgcaggcagccaaccgtcctggcgtcga                                                                                                             <  5:45098‑M1/149‑42 (MQ=255)                                         cagGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAggcgtcga                                                                                                             >  7:153959‑M2/1‑141 (MQ=255)                                          agGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTCGACGCCAGGACGCCtggctgtcagccctgcaggcagccaaccgtcctg                                                                                                                    <  3:105379‑M1/149‑35 (MQ=255)                                              cATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCtggctgtcagccctgcaggcagccaaccgtcctggcgtcgacgaac                                                                                                        <  1:362914‑M1/149‑47 (MQ=255)                                               aTGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGgt                                                                                                       <  3:283695/149‑1 (MQ=255)                                                tGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGgtg                                                                                                      >  3:165890/1‑149 (MQ=255)                                                   cTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTc                                                                                                   <  7:54497/149‑1 (MQ=255)                                                   cTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTc                                                                                                   >  6:62520/1‑149 (MQ=255)                                                    tGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCg                                                                                                  >  1:161980/1‑149 (MQ=255)                                                     gATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCgg                                                                                                 >  8:247699/1‑149 (MQ=255)                                                      aTGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCgg                                                                                                 <  7:247699/148‑1 (MQ=255)                                                          cTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCg                                                                                            <  3:312144/149‑1 (MQ=255)                                                                cGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGTCCAGGCCTTGCTGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGcc                                                                                      >  5:264359/1‑149 (MQ=255)                                                                cGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGcc                                                                                      >  8:87631/1‑149 (MQ=255)                                                                     tCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCgg                                                                                 >  5:2633/1‑149 (MQ=255)                                                                      cTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGc                                                                                >  7:245114/1‑149 (MQ=255)                                                                       ttCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGct                                                                               >  5:290707/1‑149 (MQ=255)                                                                         cGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGctct                                                                             >  4:293478/1‑149 (MQ=255)                                                                             ctaCGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGa                                                                         <  6:264359/147‑1 (MQ=255)                                                                             cAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGa                                                                         <  1:242943/149‑1 (MQ=255)                                                                              aaCGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAg                                                                        <  1:101428/149‑1 (MQ=255)                                                                              aaCGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAg                                                                        <  3:180794/149‑1 (MQ=255)                                                                                 ggTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGtt                                                                     >  6:27273/1‑149 (MQ=255)                                                                                 ggTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGtt                                                                     <  5:87164/149‑1 (MQ=255)                                                                                     tCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTc                                                                  <  3:293478/148‑1 (MQ=255)                                                                                       aaGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCt                                                                                     <  3:237017/127‑1 (MQ=255)                                                                                       aaGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCt                                                                                     >  4:237017/1‑127 (MQ=255)                                                                                            gtggtgTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGt                                                          <  5:27273/149‑1 (MQ=255)                                                                                             tggtgTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTg                                                         <  7:87631/149‑1 (MQ=255)                                                                                               gtgtGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGAGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAg                                                                        <  5:246392/132‑1 (MQ=255)                                                                                               gtgtGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGAGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAg                                                                        >  6:246392/1‑132 (MQ=255)                                                                                                    cGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTGCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACgg                                                  <  4:189422/149‑1 (MQ=255)                                                                                                       gTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGccc                                               >  1:242498/1‑149 (MQ=255)                                                                                                        tGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGGGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCt                                              <  6:290707/149‑1 (MQ=255)                                                                                                         ggCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTg                                             >  3:176815/1‑149 (MQ=255)                                                                                                         ggCCAGGCCTTGCGGAATGCCAGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACCCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGGTGTCCCAGCCGTGCGCACGGCCCTg                                             >  7:66269/1‑149 (MQ=255)                                                                                                           ccAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTgcg                                           >  3:20387/1‑149 (MQ=255)                                                                                                            cAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTgcgc                                          >  7:284123/1‑149 (MQ=255)                                                                                                                    gCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGAc                                       >  4:306662/1‑144 (MQ=255)                                                                                                                    gCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGAc                                       <  3:306662/144‑1 (MQ=255)                                                                                                                    gCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGt                                  >  2:108465/1‑149 (MQ=255)                                                                                                                         aTGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTg                             <  6:2633/149‑1 (MQ=255)                                                                                                                           gCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGAc                           >  2:947/1‑149 (MQ=255)                                                                                                                              tGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGcgcg                                         <  4:181511/132‑1 (MQ=255)                                                                                                                                gcgcTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGcc                       <  1:947/148‑1 (MQ=255)                                                                                                                                 cgcTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTg                     <  4:20387/149‑1 (MQ=255)                                                                                                                                       tgTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCa                 >  3:145053/1‑147 (MQ=255)                                                                                                                                        gTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAggcgtcgacgaacagcagcgccaggcattccgcaaggcctggccacccgcacaccaccccttgataccgttgctcgaagaccacggccaaggcatcagccatg              <  1:362914‑M2/149‑104 (MQ=255)                                                                                                                                         ttCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATa               <  5:72996/147‑1 (MQ=255)                                                                                                                                           cgtc‑‑‑‑‑‑‑‑gACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGc            <  8:284123/148‑1 (MQ=255)                                                                                                                                            gtc‑‑‑‑‑‑‑‑gACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGa          >  5:223961/1‑149 (MQ=255)                                                                                                                                             tc‑‑‑‑‑‑‑‑gACGCCtggctgtcagccctgcaggcagccaaccgtcctggcgtcgacgaacagcagcgccaggcattccgcaaggcctggccacccgcacaccaccccttgataccgttgctcgaagaccacggccaaggcatcagccatgtcctg         >  7:153959‑M1/1‑8 (MQ=255)                                                                                                                                             tc‑‑‑‑‑‑‑‑gACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAgacgtcgacgaacagcagcgccaggcattccgcaaggcctggccacccgcacaccaccccttgataccgttgctcgaagaccacggccaaggcatcagccatgtcctg         <  5:45098‑M2/149‑109 (MQ=255)                                                                                                                                                       gACGCCtggctgtcagccctgcaggcagccaaccgtcctggcgtcgacgaacagcagcgccaggcattccgcaaggcctggccacccgcacaccaccccttgataccgttgctcgaagaccacggccaaggcatcagccatgtcctgc        <  4:283695‑M1/148‑143 (MQ=255)                                                                                                                                                       gACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAggcgtcgacgaacagcagcgccaggcattccgcaaggcctggccacccgcacaccaccccttgataccgttgctcgaagaccacggccaaggcatcagccatgtcctgct       >  2:362914‑M2/1‑39 (MQ=255)                                                                                                                                                           cctggctgtcagccctgcaggcagccaaccgtcctggcgtcgacgaacagcagcgccaggcattccgcaaggcctggccacccgcacaccaccccttgataccgttgctcgaagaccacggccaaggcatcagccatgtcctgctgctg   <  6:72996‑M1/149‑148 (MQ=255)                                                                                                                                                            ctggctgtcagccctgcaggcagccaaccgtcctggcgtcgacgaacagcagcgccaggcattccgcaaggcctggccacccgcacaccaccccttgataccgttgctcgaagaccacggccaaggcatcagccatgtcctgctgctg   >  6:194981‑M1/1‑1 (MQ=255)                                                                                                                                                            cAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAggcgtcctggcgtcgacgaacagcagcgccaggcattccgcaaggcctggccacccgcacaccaccccttgataccgttgctcgaagaccacggccaaggcatcagccatgtcct  <  3:105379‑M2/149‑116 (MQ=255)                                                                                                                                                            |                                                                                                                                                     GCATGCCGATGCGGGCCAGCAGGCTGCCATCTTCCAGCAGCAGGACATGGCTGATGCCTTGGCCGTGGTCTTCGAGCAACGGTATCAAGGGGTGGTGTGCGGGTGGCCAGGCCTTGCGGAATGCCTGGCGCTGCTGTTCGTC‑‑‑‑‑‑‑‑GACGCCAGGACGGTTGGCTGCCTGCAGGGCTGACAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCC  >  NC_002947/2775145‑2775440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.