New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2796617 | 55 (0.910) | 4 (0.070) | 4/254 | NT | 6.8% | intergenic (+50/‑123) | PP_t42/PP_t43 | tRNA‑Val/tRNA‑Val |
? | NC_002947 | = 2796643 | 58 (1.010) | intergenic (+76/‑97) | PP_t42/PP_t43 | tRNA‑Val/tRNA‑Val |
TGCGTAGAATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2796467‑2796617 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccatGCCGCGGTATTCCCGCTCGCGCGGCAATGGACAATG < NC_002947/2796643‑2796608 TGCGTAGAATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTC > 6:272578/1‑148 GAATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATGCCG > 7:289412/1‑149 TCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCA > 5:66737/1‑115 TCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCA < 6:66737/115‑1 AGTTGGTTAGCGCACCAACTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGCTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATGCCGCGGTATTCCCGCTCGCGCGGCAATGGACAA < 7:309910/148‑1 GTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATGCCGCGGTATTCCCGCTCGCGCGGCAATGGACAATG < 8:289412/149‑1 GCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATGCCGCGGTATTCCCGCTCGCGCGGCAATGGACAAT < 3:163608/138‑1 GCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATGCCGCGGTATTCCCGCTCGCGCGGCAATGGACAAT > 4:163608/1‑138 TGCGTAGAATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2796467‑2796617 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccatGCCGCGGTATTCCCGCTCGCGCGGCAATGGACAATG < NC_002947/2796643‑2796608 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |