New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2796617	55 (0.910)	4 (0.070)	4/254	NT	6.8%	intergenic (+50/‑123)	PP_t42/PP_t43	tRNA‑Val/tRNA‑Val
	?	NC_002947	= 2796643	58 (1.010)					intergenic (+76/‑97)	PP_t42/PP_t43	tRNA‑Val/tRNA‑Val

GTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTC  >  NC_002947/2796509‑2796788                                                                                                                                       |                                                                                                                                                  gTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGGCGCAAAgcg                                                                                                                                     >  5:131173/1‑149 (MQ=255)  ttAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAgcgc                                                                                                                                    <  7:157465/149‑1 (MQ=255)         accaccTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCAtt                                                                                                                             <  3:9884/149‑1 (MQ=255)         accaccTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCAt                                                                                                                              >  8:333246/1‑148 (MQ=255)              cTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAAAACCGCGGCATGGACGCAAAGAGCTTTCATTCGaaa                                                                                                                        >  7:178605/1‑149 (MQ=255)                      ggtggGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGa                                                                                                                >  6:297129/1‑149 (MQ=255)                       gtggGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGAt                                                                                                               >  4:169898/1‑149 (MQ=255)                                gTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCa                                                                                                       <  5:305551/148‑1 (MQ=255)                                    gTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTtct                                                                                                         >  8:340648/1‑142 (MQ=255)                                    gTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTtct                                                                                                         <  7:340648/142‑1 (MQ=255)                                       cGAGTCGAATTCTGCCTACCACATCGAAACAGGGCTTCTCCGAAAGGTTCACCCCTTTTTGCATTGTCCCTTGCCGCGCGAGCGGGAATACCGCGGCTTGGACGCAAAGCGCTTTCATTCCAAAGTTTTTGATTTTTCTCAAAAAagag                                                                                               <  8:178605/149‑1 (MQ=255)                                          gTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAGGAGCtt                                                                                            >  2:105606/1‑149 (MQ=255)                                          gTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCtt                                                                                            <  4:8250/149‑1 (MQ=255)                                          gTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCtt                                                                                            >  3:8250/1‑149 (MQ=255)                                           tCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCtt                                                                                            >  7:220328/1‑148 (MQ=255)                                             cAATTGTGCCTACCAAATCGAATAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCttt                                                                                           <  8:36906/147‑1 (MQ=255)                                             cAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCttt                                                                                           >  7:36906/1‑147 (MQ=255)                                             cAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTa                                                                                          <  8:195339/148‑1 (MQ=255)                                             cAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTa                                                                                          >  7:296784/1‑148 (MQ=255)                                              aaTTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACa                                                                                        <  7:333246/149‑1 (MQ=255)                                                   tgCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTAc                                                                                   <  5:299622/149‑1 (MQ=255)                                                    gCCTACCAAATCCAAAAAGGGGTGTTCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCTCGAGTGGTAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTAc                                                                                   <  7:56518/148‑1 (MQ=255)                                                          cAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCgg                                                                            <  3:169898/149‑1 (MQ=255)                                                          aaaaTCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCTCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCgg                                                                            <  7:182395/148‑1 (MQ=255)                                                           aaaTCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCggg                                                                           >  5:28733/1‑149 (MQ=255)                                                               gaaaaaaGGGGTGACCCTTTCGGATCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCAAc                                                                       >  2:1664/3‑149 (MQ=38)                                                                 aaaaaGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACt                                                                      >  5:62437/1‑148 (MQ=255)                                                                   aaaGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTaa                                                                    >  1:154237/1‑148 (MQ=255)                                                                     aGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTATCAAAAAAGAGCTTTACAGGTACGCATCGGGCAACTAatat                                                                 >  7:233689/1‑149 (MQ=255)                                                                        ggTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACa                                                                                        >  8:14208/1‑123 (MQ=255)                                                                        ggTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACa                                                                                        <  7:14208/123‑1 (MQ=255)                                                                         gTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATgcgc                                                             <  6:113032/149‑1 (MQ=255)                                                                         gTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATgcg                                                              >  2:352772/1‑148 (MQ=255)                                                                         gTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATgcg                                                              >  7:129509/1‑148 (MQ=255)                                                                            aTCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGcac                                                           <  6:62437/148‑1 (MQ=255)                                                                               cGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGGCGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACcaca                                                       <  6:131173/149‑1 (MQ=255)                                                                                gAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCacac                                                      >  2:63758/1‑149 (MQ=255)                                                                                     ggTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAg                                                 <  1:352772/149‑1 (MQ=255)                                                                                      gTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAgg                                                <  8:296784/149‑1 (MQ=255)                                                                                       tCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAgg                                                >  6:187949/1‑148 (MQ=255)                                                                                       tCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAgg                                                >  5:2241/1‑148 (MQ=255)                                                                                           cccTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGcaca                                            >  7:132510/1‑148 (MQ=255)                                                                                           cccTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACAt                                           <  8:220328/149‑1 (MQ=255)                                                                                            ccTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGAGTTTTCTCAAATAAGAGCTTTAAAGGTGCGCATCGGGCCACTAATATGCGCACAACACGACCGGcacagc                                          >  8:336510/1‑147 (MQ=255)                                                                                                 tttCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTAc                                                                                         >  4:323968/1‑97 (MQ=255)                                                                                                 tttCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTAc                                                                                         <  3:323968/97‑1 (MQ=255)                                                                                                    cATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCatggacaatgaaaaaaggggtgaccctttcggatcacccctttttcgatttggtaggcacaattggactcgaaccaacgacccccaccatgtcaaggtggtgctctaaccaac                                  <  8:289412‑M2/149‑114 (MQ=255)                                                                                                     aTTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCatggacaatgaaaaaaggggtgaccctttcggatcacccctttttcgatttggtaggcacaattggactcgaaccaacgacccccaccatgtcaaggtggtgc                                            >  4:163608‑M2/1‑35 (MQ=255)                                                                                                     aTTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCatggacaatgaaaaaaggggtgaccctttcggatcacccctttttcgatttggtaggcacaattggactcgaaccaacgacccccaccatgtcaaggtggtgc                                            <  3:163608‑M2/138‑104 (MQ=255)                                                                                                     aTTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGtt                                  <  8:132510/148‑1 (MQ=255)                                                                                                      ttGTCCATTGCCGCGCGAGCGGGAATACCGCGGCatggacaatgaaaaaaggggtgaccctttcggatcagccctttttcgatttggtaggcacaattggactcgaaccaacgacccccaccatgtcaagttggtgcgctaaccaact                                 <  7:309910‑M2/148‑115 (MQ=255)                                                                                                         tCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAGGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTa                             <  1:105606/149‑1 (MQ=255)                                                                                                               gCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGcac                       >  2:189254/1‑149 (MQ=255)                                                                                                                ccGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTagacccc                       >  2:155559/1‑144 (MQ=255)                                                                                                                ccGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGcacc                      >  2:12003/1‑149 (MQ=255)                                                                                                                ccGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGcac                       <  8:129509/148‑1 (MQ=255)                                                                                                                ccGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGcac                       >  3:293825/1‑148 (MQ=255)                                                                                                                ccGCGCGAGCGGGAATACCGCGGCACGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGcac                       >  2:129834/1‑148 (MQ=255)                                                                                                                      gAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCtt                 >  4:20313/1‑148 (MQ=255)                                                                                                                       aGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGa               >  7:328843/1‑149 (MQ=255)                                                                                                                        gCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGa               >  8:177843/1‑148 (MQ=255)                                                                                                                             aaTACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACAtggt         <  6:2241/149‑1 (MQ=255)                                                                                                                                   gcgGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCa                                                                        <  8:142736/80‑1 (MQ=255)                                                                                                                                   gcgGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCa                                                                        >  7:142736/1‑80 (MQ=255)                                                                                                                                    cgGCatggacaatgaaaaaaggggtgaccctttcggatcacccctttttcgatttggtaggcacaattggactcgaaccaacgacccccaccatgtcaaggtggtgctctaaccaactgagctatgtgcctgtcgtgtggtgcgcattc  >  7:289412‑M2/1‑4 (MQ=255)                                                                                                                                       |                                                                                                                                                  GTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAGTCCAATTGTGCCTACCAAATCGAAAAAGGGGTGATCCGAAAGGGTCACCCCTTTTTTCATTGTCCATTGCCGCGCGAGCGGGAATACCGCGGCATGGACGCAAAGCGCTTTCATTCGAAAGTTTTTGATTTTTCTCAAAAAAGAGCTTTACAGGTACGCATCGGGCCACTAATATGCGCACCACACGACAGGCACATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTC  >  NC_002947/2796509‑2796788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.