| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2857961 = | 55 (0.910) | 4 (0.070) | 3/248 | NT | 8.0% | noncoding (86/88 nt) | PP_mr37 | C4 ncRNA |
| ? | NC_002947 | 2858006 = | 41 (0.730) | noncoding (41/88 nt) | PP_mr37 | C4 ncRNA | |||||
CCTGTCGCCACCCATTGGCGGCACGGTTTTGACAGACCGTGGTTCACTGAGAGCATGTGCGATGCCAGTTATGGCAGCTGTGCGTGGGTTACCTTCGTGTGTGCAGGGATTCTCAGTGCCCCCGGTCTGTCAACCCACAAACAGCTGCACTGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2858115‑2857961‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcactgagaATCCCTGCACACACGAAGGTAACCCACGCACAGCTGCCATAACTGGCATCGCACATGCTCTCAGTGAACCACGGTCTGTCAAAACCGTGCCGCCAATGGGTGGCGACAGGCCGAGACTAGGGCTGACTATTTCCATGTGCAAA > NC_002947/2858006‑2858148 CCTGTCGCCACCCATTGGCGGCACGGTTTTGACAGACCGTGGTTCACTGAGAGCATGTGCGATGCCAGTTATGGCAGCTGTGCGTGGGTTACCTTCGTGTGTGCAGGGATTCTCAGTGCCCCCGGTCTGTCAACCCACAAACAGCTGCA > 7:143087/1‑149 gaCACCAATTGGCGGCACGGTTTTGACAGACCGTTGTTCACTGAGAGCATGTTCGATGCCATTTATGGCAGCTGTGCGTGGGTTACCTTCGTGTGTGCAGGGATTCTCAGTGCCCCCGGTCTGTCAACCCACAAACAGCTGCACTGAGA < 1:190504/147‑1 ACAGACCGTGGTTCACTGAGAGCATGTGCGATGCCAGTTATGGCAGCTGTGCGTGGGTTACCTTCGTGTGTGCAGGGATTCTCAGTGCCCCCGGTCTGTCAACCCACAAACAGCTGCACT > 1:87580/1‑120 ACAGACCGTGGTTCACTGAGAGCATGTGCGATGCCAGTTATGGCAGCTGTGCGTGGGTTACCTTCGTGTGTGCAGGGATTCTCAGTGCCCCCGGTCTGTCAACCCACAAACAGCTGCACT < 2:87580/120‑1 GATTCTCAGTGCCCCCGGTCTGTCAACCCACAAACAGCTGCACTGAGAATCCCTGCACACACGAAGGTAACCCACGCACAGCTGCCATAACTGGCATCGCACATGCTCTCAGTGAACCACGGTCTGTCAAAACCGT < 1:338218/136‑1 GATTCTCAGTGCCCCCGGTCTGTCAACCCACAAACAGCTGCACTGAGAATCCCTGCACACACGAAGGTAACCCACGCACAGCTGCCATAACTGGCATCGCACATGCTCTCAGTGAACCACGGTCTGTCAAAACCGT > 2:338218/1‑136 ATTCTCAGTGCCCCCGGTCTGTCAACCCACAAACAGCTGCACTGAGAATCCCTGCACACACGAAGGTAACCCACGCACAGCTGCCATAACTGGCATCGCACATGCTCTCAGTGAACCACGGTCTGTCAAAACCGTGCCGCCAATGGGTG > 3:311370/1‑149 ATTCTCAGTGCCCCCGGTCTGTCAACCCACAAACAGCTGCACTGAGAATCCCTGCACACACGAAGGTAACCCACGCACAGCTGCCATAACTGGCATCGCACATGCTCTCAGTGAACCACGGTCTGTCAAAACCGTGCCGCCAATGGGTG > 3:316590/1‑149 CTGAGAATCCCTGCACACACGAAGGTAACCCACGCACAGCTGCCATAACTGGCATCGCAGATGCTCTCAGTGAACCACGGTCTGTCAAAACCGTGCCGCCAATGGGTGGCGACAGGCCGAGACTAGGGCTGACTATTTCCATGTGCAAA < 5:238982/149‑1 CCTGTCGCCACCCATTGGCGGCACGGTTTTGACAGACCGTGGTTCACTGAGAGCATGTGCGATGCCAGTTATGGCAGCTGTGCGTGGGTTACCTTCGTGTGTGCAGGGATTCTCAGTGCCCCCGGTCTGTCAACCCACAAACAGCTGCACTGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2858115‑2857961‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcactgagaATCCCTGCACACACGAAGGTAACCCACGCACAGCTGCCATAACTGGCATCGCACATGCTCTCAGTGAACCACGGTCTGTCAAAACCGTGCCGCCAATGGGTGGCGACAGGCCGAGACTAGGGCTGACTATTTCCATGTGCAAA > NC_002947/2858006‑2858148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |