| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2903383 = | 46 (0.760) | 4 (0.070) | 4/250 | NT | 8.5% | coding (193/681 nt) | PP_2555 | hypothetical protein |
| ? | NC_002947 | 2903428 = | 43 (0.760) | coding (148/681 nt) | PP_2555 | hypothetical protein | |||||
AGTTGGCACCAGAACGCCCAGGCCTGGATCGACGCCGTACGCCATGGCGCCATCGAAAGCCGTCGCCAGGTCACTGACCAGGCCATCCTGCTGGCCATCCTTGGCCGCCAGCCCGAACGGGTGCTCGACCTGGGCTGCGGTGAGGGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2903533‑2903383‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctggcGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTCTTCAGGGTTGCGCATGATCGGCTCC > NC_002947/2903428‑2903573 AGTTGGCACCAGAACGCCCAGGCCTGGATCGACGCCGTACGCCATGGCGCCATCGAAAGCCGTCGCCAGGTCACTGACCAGGCCATCCTGCTGGCCATCCTTGGCCGCCAGCCCGAACGGGTGCTCGACCTGGGCTGCGGTGAGGGCTG > 7:185547/1‑149 gTGGCACCAGAACGCGCAGGACCGGCTCGAGGCCGTACGCCATCGCGCCATCGATAGCCGTCGCCAGGTCACTGACCAGGCCATCCTGCTTGCGATCCTTGTCCTCCAGCCCGAACGGGTGCTCGACCTGGGCTGCTGTGAGGGCTGG < 4:183728/147‑1 CCGCCAGCCCGAACGGGTGCTCGACCTGGGCTGCGGTGAGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGC > 6:345203/1‑148 CGCCAGCCCGAACGGGTGCTCGACCTGGGCTGCGGTGAGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCC > 8:306003/1‑148 GCCAGCCCGAACGGGTGCTCGACCTGGGCTGCGGTGAGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAA < 5:345203/149‑1 CCTGGGCTGCGGTGAGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTCTTCAG < 7:306003/149‑1 GGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTCTTCAGGGTTGCGCATGATCGG < 6:13344/149‑1 GGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTCTTCAGGGTTGCGCATGATCGGCTCC < 7:152148/149‑1 AGTTGGCACCAGAACGCCCAGGCCTGGATCGACGCCGTACGCCATGGCGCCATCGAAAGCCGTCGCCAGGTCACTGACCAGGCCATCCTGCTGGCCATCCTTGGCCGCCAGCCCGAACGGGTGCTCGACCTGGGCTGCGGTGAGGGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2903533‑2903383‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctggcGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTCTTCAGGGTTGCGCATGATCGGCTCC > NC_002947/2903428‑2903573 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |