New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2903383 =	46 (0.760)	4 (0.070)	4/250	NT	8.5%	coding (193/681 nt)	PP_2555	hypothetical protein
	?	NC_002947	2903428 =	43 (0.760)					coding (148/681 nt)	PP_2555	hypothetical protein

GGTGCACCTCACCCGCGCCCGCAGCTCGCGCTGCATCCACCAGCGTTCTGTCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTCTTCAGGGTTGCGCATGATCGGCTCC  >  NC_002947/2903281‑2903573                                                                                                                                                    |                                                                                                                                                  ggcaccagaacgcccaggcctggatcgacgccgtacgccatggcgccatcgaaagccgtcgccaggtcactgaccaggccatcctgctggccatccttggccGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTggcg                                                                                                                                                   >  8:306003‑M1/103‑148 (MQ=255)  gcaccagaacgcccaggcctggatcgacgccgtacgccatggcgccatcgaaagccgtcgccaggtcactgaccaggccatcctgctggccatccttggccGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTggcgg                                                                                                                                                  >  6:345203‑M1/102‑148 (MQ=255)        cTCACCCGCGCCCGCAGCTCGCGCTGCATCCACCAGCGTTCTGTCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGa                                                                                                                                           >  1:137784/1‑149 (MQ=255)           aCCCGCGCCCGCAGCTCGCGCTGCATCCACCAGCGTTCTGTCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATgg                                                                                                                                        >  1:214733/1‑149 (MQ=255)             ccGCGCCCGCAGCTCGCGCTGCATCCACCAGCGTTCTGTCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGGTCGGGCTGGCGGCCACGGGTGGcc                                                                                                                                      >  6:196255/1‑149 (MQ=255)               gcgcCCGCAGCTCGCGCTGCATCCACCAGCGTTCTGTCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCcag                                                                                                                                    <  6:174233/149‑1 (MQ=255)                tggatgCAGCGCGAGCTGCATCCACCAGCGTTCTGTCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCcag                                                                                                                                    >  2:237573/6‑148 (MQ=255)                           cgcgCTGCATCCACCAGCGTTCTGTCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCTGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTg                                                                                                                        <  8:352640/149‑1 (MQ=255)                              gcTGCATCCACCAGCGTTCTGTCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGt                                                                                                                      >  7:210327/1‑148 (MQ=255)                               cTGCATCCACCAGCGTTCTGTCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCa                                                                                                                    <  8:267909/149‑1 (MQ=255)                               cTGCATCCACCAGCGTTCTGTCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCa                                                                                                                    <  2:110982/149‑1 (MQ=255)                                      caccaGCGTTCTGTCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCt                                                                                                             >  5:299626/1‑149 (MQ=255)                                      caccaGCGTTCTGTCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCt                                                                                                             >  2:375278/1‑149 (MQ=255)                                      caccaGCGTTCTGTCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCt                                                                                                             <  3:34758/149‑1 (MQ=255)                                         caGCGTTCTGTCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGc                                                                                                          >  7:190649/1‑149 (MQ=255)                                           gCGTTCTGTCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGa                                                                                                        <  7:220231/149‑1 (MQ=255)                                                   tCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCttt                                                                                                 <  1:237573/148‑1 (MQ=255)                                                    cGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTc                                                                                                >  1:135091/1‑148 (MQ=255)                                                     gCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCCGTGACCTGGCGACGGCTTTCGa                                                                                              <  5:196255/149‑1 (MQ=255)                                                     gCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGa                                                                                              >  3:96089/1‑149 (MQ=255)                                                     gCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGAGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGa                                                                                              >  6:375833/1‑149 (MQ=255)                                                                ccACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATgg                                                                                   >  6:355481/1‑149 (MQ=255)                                                                 cACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGc                                                                                  >  1:138654/1‑149 (MQ=255)                                                                       cTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACgg                                                                            >  4:256666/1‑149 (MQ=255)                                                                           aTACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGTTGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTc                                                                        <  6:299626/149‑1 (MQ=255)                                                                               cccGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATc                                                                    >  8:152148/1‑149 (MQ=255)                                                                               cccGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATc                                                                    >  8:185547/1‑149 (MQ=255)                                                                               cccGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATc                                                                    >  6:122448/1‑149 (MQ=255)                                                                                  ggTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCTATCCAg                                                                 <  2:138654/149‑1 (MQ=255)                                                                                       gCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTg                                                            >  5:13344/1‑149 (MQ=255)                                                                                        ccAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCg                                                                       >  1:40639/1‑137 (MQ=255)                                                                                        ccAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCg                                                                       <  2:40639/137‑1 (MQ=255)                                                                                        ccAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTgg                                                           >  2:197599/1‑149 (MQ=255)                                                                                         cAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCTAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTggg                                                          <  3:256666/149‑1 (MQ=255)                                                                                                    gcagcCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGc                                               <  1:375278/149‑1 (MQ=255)                                                                                                     ccgccagcccgaacgggtgctcgacctgggctgcggtgagggctggcGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGc                                               >  6:345203‑M2/48‑148 (MQ=255)                                                                                                      cgccagcccgaacgggtgctcgacctgggctgcggtgagggctggcGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGcc                                              >  8:306003‑M2/47‑148 (MQ=255)                                                                                                       gccagcccgaacgggtgctcgacctgggctgcggtgagggctggcGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCaa                                            <  5:345203‑M2/104‑1 (MQ=255)                                                                                                        CCAGCCCTCACAGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGAGGACAAGGATCGCAAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTATCGATGGCGCGATGGCGTACGGCCTCGAGCCGGTCCTGCGCGTTCTGGTGCcac                                            <  4:183728‑M1/148‑2 (MQ=255)                                                                                                         CAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACt                                          >  7:185547‑M1/1‑149 (MQ=255)                                                                                                               tCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGcc                                              <  1:248061/139‑1 (MQ=255)                                                                                                               tCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGcc                                              >  2:248061/1‑139 (MQ=255)                                                                                                                      aGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCg                             >  6:307878/1‑149 (MQ=255)                                                                                                                        cccAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTc                           <  2:137784/149‑1 (MQ=255)                                                                                                                        cccAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTc                           >  4:344224/1‑149 (MQ=255)                                                                                                                          cAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCAAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTCtt                         <  8:127609/149‑1 (MQ=255)                                                                                                                            ggTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTCTTCa                       <  4:93267/149‑1 (MQ=255)                                                                                                                             cctgggctgcggtgagggctggcGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTCTTCAg                      <  7:306003‑M2/126‑1 (MQ=255)                                                                                                                               cGAGCACCCGTTCGGGCTGGCGGCCCAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTCTTCAggg                    >  2:173216/1‑149 (MQ=255)                                                                                                                                   cACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTCTTCAGGGTTgc                <  2:193541/149‑1 (MQ=255)                                                                                                                                     cccGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTCTTCAGGGTTgcgc              <  5:355481/149‑1 (MQ=255)                                                                                                                                           cGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTCTTCAGGGTTGCGCATGAt         <  4:96089/148‑1 (MQ=255)                                                                                                                                             ggctggcGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTCTTCAGGGTTGCGCATGATCgg      <  6:13344‑M2/142‑1 (MQ=255)                                                                                                                                                 ggcGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTCTTCAGGGTTGCGCATGATCGGCTcc  <  7:152148‑M2/146‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GGTGCACCTCACCCGCGCCCGCAGCTCGCGCTGCATCCACCAGCGTTCTGTCGCCGTCGACGCCCACGGCCTCGATACCCCGGTCGGCCAGCGCGCGCAGCAGCCAGCCCTCACCGCAGCCCAGGTCGAGCACCCGTTCGGGCTGGCGGCCAAGGATGGCCAGCAGGATGGCCTGGTCAGTGACCTGGCGACGGCTTTCGATGGCGCCATGGCGTACGGCGTCGATCCAGGCCTGGGCGTTCTGGTGCCAACTGTCGAGCAAGGCGTCTTCAGGGTTGCGCATGATCGGCTCC  >  NC_002947/2903281‑2903573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.