| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2945907 = | 59 (0.980) | 4 (0.070) | 4/252 | NT | 7.1% | coding (1615/1755 nt) | yijP | phosphoethanolamine transferase CptA |
| ? | NC_002947 | 2945943 = | 49 (0.860) | coding (1579/1755 nt) | yijP | phosphoethanolamine transferase CptA | |||||
CACCATCCCGTTCCTGCTGTGGACCTCGCCTAGCTGGCAGGCCGAGCACCCGCGTGACTTGCAGGCAATGGCCAACCGCCCCTACAGCAGTTCACACCTGATCCATACCCTGTCAGACCTGGCCGGGTTGAGCTATGACCGCTATGAACCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2946061‑2945907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggccaGGTCTGACAGGGTATGGATCAGGTGTGAACTGCTGTAGGGGCGGTTGGCCATTGCCTGCAAGTCACGCGGGTGCTCGGCCTGCCAGCTAGGCGAGGTCCACAGCAGGAACGGGATGGTGTACATC > NC_002947/2945943‑2946067 CACCATCCCGTTCCTGCTGTGGACCTCGCCTAGCTGGCAGGCCGAGCACCCGCGTGACTTGCAGGCAATGGCCAACCGCCCCTACAGCAGTTCACACCTGATCCATACCCTGTCAGACCTGGCCGGGTTGAGCTATGACCGCTATGAAC > 5:298346/1‑149CACCATCCCGTTCCTGCTGTGGACCTCGCCTAGCTGGCAGGCCGAGCACCCGCGTGACTTGCAGGCAATGGCCAACCGCCCCTACAGCAGTTCACACCTGATCCATACCCTGTCAGACCTGGCCGGGTTGAGCTATGACCGCTATGAAC < 6:230946/149‑1 CATCCCGTTCCTGCTGTGGACCTCGCCTAGCTGGCAGGCCGAGCACCCGCGTGACTTGCAGGCAATGGCCAACCGCCCCTACAGCAGTTCACACCTGATCCATACCCTGTCAGACCTGGCCGGGTTGAGCTATGACCGCTATGAACCGG > 8:162714/1‑149 TCCCGTTCCTGCTGTGGACCTCGCCTAGCTGGCAGGCCGAGCACCCGCGTGACTTGCAGGCAATGGCCAACCGCCCCTACAGCAGTTCACACCTGATCCATACCCTGTCAGACCTGGCCGGGTTGAGCTATGACCGCTATGAACCGGC > 4:151779/1‑148 CCGTTCCTGCTGTGGACCTCGCCTAGCTGGCAGGCCGAGCACCCGCGTGACTTGCAGGCAATGGCCAACCGCCCCTACAGCAGTTCACACCTGATCCATACCCTGTCAGACCTGGCCGGGTTGAGCTATGACCGCTATGAACCGGCC > 3:126001/1‑147 GACCTGGCCGGGTTGAGCTATGACCGCTATGAACCGGCCAGGTCTGACAGGGTATGGATCAGGTGTGAACTGCTGTAGGGGCGGTTGGCCATTGCCTGCAAGTCACGCGGGTGCTCGGCCTGCCAGCTAGGCGAGGTCCACAGCAGGAA > 5:266023/1‑149 CTGGCCGGGTTGAGCTATGACCGCTATGAACCGGCCAGGTCTGACAGGGTATGGATCAGGTGTGAACTGCTGTAGGGGCGGTTGGCCATTGCCTGCAAGTCACGCGGGTGCTCGGCCTGCCAGCTAGGCGAGGTCCACAGCAGGAACG > 7:151783/1‑148 CTGGCCGGGTTGAGCTATGACCGCTATGAACCGGCCAGGTCTGACAGGGTATGGATCAGGTGTGAACTGCTGTAGGGGCGGTTGGCCATTGCCTGCAAGTCACGCGGGTGCTCGGCCTGCCAGCTAGGCGAGGTCCACAGCAGGAACG < 8:151783/148‑1 GCTATGACCGCTATGAACCGGCCAGGTCTGACAGGGTATGGATCAGGTGTGAACTGCTGTAGGGGCGGTTGGCCATTGCCTGCAAGTCACGCGGGTGCTCGGCCTGCCAGCTAGGCGAGGTCCACAGCAGGAACGGGATGGTGTACATC < 6:266023/149‑1 CACCATCCCGTTCCTGCTGTGGACCTCGCCTAGCTGGCAGGCCGAGCACCCGCGTGACTTGCAGGCAATGGCCAACCGCCCCTACAGCAGTTCACACCTGATCCATACCCTGTCAGACCTGGCCGGGTTGAGCTATGACCGCTATGAACCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2946061‑2945907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggccaGGTCTGACAGGGTATGGATCAGGTGTGAACTGCTGTAGGGGCGGTTGGCCATTGCCTGCAAGTCACGCGGGTGCTCGGCCTGCCAGCTAGGCGAGGTCCACAGCAGGAACGGGATGGTGTACATC > NC_002947/2945943‑2946067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |