New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2981145 = | 71 (1.180) | 6 (0.110) | 6/246 | NT | 9.0% | coding (1220/1734 nt) | PP_2607 | hypothetical protein |
? | NC_002947 | 2981176 = | 55 (0.990) | coding (1189/1734 nt) | PP_2607 | hypothetical protein |
GTAGACCAAACCGGGCGGCGCTTCGTCAACGAGTCCGACTCCTACCACCACTTCGTGCACACAATGTTCGCCAAAGGCATTGCCAGCTGCTGGCTGGTCTGCGATGCCGAGGCAATGAACCGCTACGGGCTTGGCCTGGCGCGGCCCAAGCCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2981299‑2981145 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaagcccgtAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTGACGAAGCGCCGCCCGGTTTGGTCTACCGCAATCACGCCCGGCTTGGCG > NC_002947/2981176‑2981321 GTAGACCAAACCGGGCGGCGCTTCGTCAACGAGTCCGACTCCTACCACCACTTCGTGCACACAATGTTCGCCAAAGGCATTGCCAGCTGCTGGCTGGTCTGCGATGCCGAGGCAATGAACCGCTACGGGCTTGGCCTGGCGCGGCCC > 2:33340/1‑147 CCAAACCGGGCGGCGCTTCGTCAACGAGTCCGACTCCTACCACCACTTCGTGCACACAATGTTCGCCAAAGGCATTGCCAGCTGCTGGCTGGTCTGCGATGCCGAGGCAATGAACCGCTACGGGCTTGGCCTGGCGCGGCCCAAGCCCG < 7:336819/149‑1 GGCGCTTCGTCAACGAGTCCGACTCCTACCACCACTTCGTGCACACAATGTTCGCCAAAGGCATTGCCAGCTGCTGGCTGGTCTGCGATGCCGAGGCAATGAACCGCTACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCAT < 5:13459/149‑1 CGGGCTTGGCCTGGCGCGGCCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTGACGAAGCGCCGCCCGGTTTG < 6:13459/148‑1 GGCTTGGCCTGGCGCGGCCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCG > 5:57165/1‑84 GGCTTGGCCTGGCGCGGCCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCG < 6:57165/84‑1 GCTTGGCCTGGCGCGGCCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTG < 7:52153/125‑1 GCTTGGCCTGGCGCGGCCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTG > 8:52153/1‑125 GCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTGACGAAGCGCCGCCCGGTTTGGTCTACCGCAATCACGCCCGGCTTG < 3:244049/149‑1 CGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTGACGAAGCGCCGCCCGGTTTGGTCTACCGCAATCACGCCCGGCTTGGCG > 6:384854/1‑149 GTAGACCAAACCGGGCGGCGCTTCGTCAACGAGTCCGACTCCTACCACCACTTCGTGCACACAATGTTCGCCAAAGGCATTGCCAGCTGCTGGCTGGTCTGCGATGCCGAGGCAATGAACCGCTACGGGCTTGGCCTGGCGCGGCCCAAGCCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2981299‑2981145 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaagcccgtAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTGACGAAGCGCCGCCCGGTTTGGTCTACCGCAATCACGCCCGGCTTGGCG > NC_002947/2981176‑2981321 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |