New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2981145 =71 (1.180)6 (0.110) 6/246 NT 9.0% coding (1220/1734 nt) PP_2607 hypothetical protein
?NC_002947 2981176 = 55 (0.990)coding (1189/1734 nt) PP_2607 hypothetical protein

GCGTGGTCGATGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTGACGAAGCGCCGCC  >  NC_002947/2980998‑2981286
                                                                                                                                                   |                                                                                                                                             
gCGTGGTCGATGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGAc                                                                                                                                              <  7:347595/149‑1 (MQ=255)
gCGTGGTCGATGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGAc                                                                                                                                              >  5:3786/1‑149 (MQ=255)
 cgccaagccgggcgtgattgcggtagaccaaaccgggcggcgcttcgtcaacgagtccgactcctaccaccacttcgtgcacacaatgttcgccaaaggcattgccagctgctggctggtctgcgatgccgaggcaatgaaccgctACg                                                                                                                                             >  6:384854‑M1/147‑149 (MQ=255)
 cGTGGTCGATGCCATTGCCGGCATCGCTGTTCAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACg                                                                                                                                             <  1:196497/149‑1 (MQ=255)
    ggTCGATGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGc                                                                                                                                          >  6:209362/1‑149 (MQ=255)
    caagccgggcgtgattgcggtagaccaaaccgggcggcgcttcgtcaacgagtccgactcctaccaccacttcgtgcacacaatgttcgccaaaggcattgccagctgctggctggtctgcgatgccgaggcaatgaaccgctACGGGc                                                                                                                                          <  3:244049‑M1/6‑1 (MQ=255)
     gTCGATGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCt                                                                                                                                         <  2:343622/149‑1 (MQ=255)
     gTCGATGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCt                                                                                                                                         >  5:180516/1‑149 (MQ=255)
        gATGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTgg                                                                                                                                      <  8:168213/149‑1 (MQ=255)
         aTGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATTTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTggg                                                                                                                                     <  8:169316/149‑1 (MQ=255)
             cATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCcgc                                                                                                                                 >  5:83523/1‑149 (MQ=255)
                   cGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAgg                                                                                                                           <  5:78469/149‑1 (MQ=255)
                   cGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAgg                                                                                                                           >  3:226283/1‑149 (MQ=255)
                     gCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGc                                                                                                                          >  4:344763/1‑148 (MQ=255)
                       aTCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCaa                                                                                                                       <  1:345877/149‑1 (MQ=255)
                           cTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAg                                                                                                                      >  1:74954/1‑146 (MQ=255)
                           cTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAg                                                                                                                      <  2:74954/146‑1 (MQ=255)
                             caaaccgggcggcgcttcgtcaacgagtccgactcctaccaccacttcgtgcacacaatgttcgccaaaggcattgccagctgctggctggtctgcgatgccgaggcaatgaaccgctACGGGCTTGGGCCGCGCCAGGCCAAGCCCg                                                                                                                  <  6:13459‑M1/30‑1 (MQ=255)
                                 aaCTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCg                                                                                                             <  4:227253/149‑1 (MQ=255)
                                    tgtgAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGtt                                                                                                          >  6:21908/1‑149 (MQ=255)
                                    tgtgAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGt                                                                                                           >  7:107001/1‑148 (MQ=255)
                                    tgagAAAGTGTTTGCGCAAACACATGTGGAACGACGCCGATGCCCAGCGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGAGCCAGCCCAAGACCGTAGCgct                                                                                                           >  2:88556/4‑146 (MQ=255)
                                        aaaGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCAtt                                                                                                      >  7:49629/1‑149 (MQ=255)
                                         aaGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCAtt                                                                                                      <  5:209362/148‑1 (MQ=255)
                                         aaGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCAtt                                                                                                      <  8:44497/148‑1 (MQ=255)
                                         aaGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTg                                                                                                     >  3:32123/1‑149 (MQ=255)
                                               ttGCGCAAACCCCTGTGGATCGCCGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGACCGTAGCGGTTCATTGCCTCgg                                                                                               >  5:83356/1‑149 (MQ=255)
                                               ttGCGCAAACACCTGTGGATCCACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCgg                                                                                               <  3:109166/149‑1 (MQ=255)
                                                 caacgagtccgactcctaccaccacttcgtgcacacaatgttcgccaaaggcattgccagctgctggctggtctgcgatgccgaggcaatgaaccgctACGGGCTTGGGCCGCGCCAGGCCAAGc                                                                                                                     >  8:52153‑M1/99‑125 (MQ=255)
                                                 caacgagtccgactcctaccaccacttcgtgcacacaatgttcgccaaaggcattgccagctgctggctggtctgcgatgccgaggcaatgaaccgctACGGGCTTGGGCCGCGCCAGGCCAAGc                                                                                                                     <  7:52153‑M1/27‑1 (MQ=255)
                                                   gcAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATc                                                                                           >  8:311595/1‑149 (MQ=255)
                                                    cAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCg                                                                                          <  7:327103/149‑1 (MQ=255)
                                                    cAAACACCTGGGGATCGACGCCGCTGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACCGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCg                                                                                          <  4:225561/149‑1 (MQ=255)
                                                     aaaCACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCg                                                                                          >  4:95119/1‑148 (MQ=255)
                                                         acCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGAc                                                                                     <  8:74763/149‑1 (MQ=255)
                                                             gtgGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGAccagc                                                                                 >  4:219910/1‑149 (MQ=255)
                                                                gATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGAccagccag                                                                              >  7:184816/1‑149 (MQ=255)
                                                                 aTCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGAccagccag                                                                              >  1:276634/1‑148 (MQ=255)
                                                                 aTCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCACGGTACAGGTAGCCTGCTTCGATCAACTCCTGGTTGTTGACGTTCTTGGGCCGCGCCAGGCAAAGCCCTTAGCGGTTCATTGCCTCGGCATCGCAGAccagccag                                                                              <  1:88556/148‑1 (MQ=255)
                                                                    gACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCagcagc                                                                          >  8:259478/1‑149 (MQ=255)
                                                                      cGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTg                                                                        <  4:264771/149‑1 (MQ=255)
                                                                      cGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTg                                                                        <  7:311595/149‑1 (MQ=255)
                                                                       gCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTgg                                                                       <  2:276634/149‑1 (MQ=255)
                                                                          gATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCaa                                                                    >  2:135353/1‑149 (MQ=255)
                                                                           aTGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTgg                                                                       >  6:258109/1‑145 (MQ=255)
                                                                           aTGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTgg                                                                       <  5:258109/145‑1 (MQ=255)
                                                                           aTGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAAt                                                                   <  6:83356/149‑1 (MQ=255)
                                                                                 agggccagTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCttt                                                             <  1:163495/149‑1 (MQ=255)
                                                                                  gggccagTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTg                                                            <  4:32123/149‑1 (MQ=255)
                                                                                       agTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGaa                                                       <  8:340247/149‑1 (MQ=255)
                                                                                           cgccaaaggcattgccagctgctggctggtctgcgatgccgaggcaatgaaccgctACGGGCTTGGGCCGCGCCAGGCCAAGcc                                                                                                                    >  5:57165‑M1/57‑84 (MQ=255)
                                                                                           cgccaaaggcattgccagctgctggctggtctgcgatgccgaggcaatgaaccgctACGGGCTTGGGCCGCGCCAGGCCAAGcc                                                                                                                    <  6:57165‑M1/28‑1 (MQ=255)
                                                                                           ccTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCTGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACAtt                                                   <  8:107001/149‑1 (MQ=255)
                                                                                           ccTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACAtt                                                   <  1:135353/149‑1 (MQ=255)
                                                                                            cTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGaa                                                       <  1:335513/144‑1 (MQ=255)
                                                                                            cTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGaa                                                       >  2:335513/1‑144 (MQ=255)
                                                                                                  tgtgGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCa                                            >  1:268685/1‑149 (MQ=255)
                                                                                                         gCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCGGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAgtg                                     >  1:65943/1‑149 (MQ=255)
                                                                                                          cccGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCGCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAgtgg                                    <  6:180516/149‑1 (MQ=255)
                                                                                                              gTACAGTTAGCCTGCGTCGATCTACGGCTGGTTGTTGACGGGCTTg                                                                                                                                       <  4:143690/46‑1 (MQ=255)
                                                                                                              gTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTg                                                                                                                                       >  3:143690/1‑46 (MQ=255)
                                                                                                              gTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGtggtgg                                 >  5:33794/1‑148 (MQ=255)
                                                                                                              gTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTggtggt                                <  6:83523/149‑1 (MQ=255)
                                                                                                                 cAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAg                              <  6:3786/148‑1 (MQ=255)
                                                                                                                   ggTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAg                           >  3:4715/1‑149 (MQ=255)
                                                                                                                     tAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTc                         <  3:95119/149‑1 (MQ=255)
                                                                                                                       gCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCGGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCg                        <  2:65943/148‑1 (MQ=255)
                                                                                                                       gCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCg                        <  5:21908/148‑1 (MQ=255)
                                                                                                                        ccTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGa                      <  7:259478/149‑1 (MQ=255)
                                                                                                                         cTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGAc                     <  4:4715/149‑1 (MQ=255)
                                                                                                                          tGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACt                    >  7:107040/1‑149 (MQ=255)
                                                                                                                              tCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGtt                <  7:204479/149‑1 (MQ=255)
                                                                                                                              tCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGtt                >  1:256376/1‑149 (MQ=255)
                                                                                                                              tCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGtt                <  5:215985/149‑1 (MQ=255)
                                                                                                                                gATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTGa              <  8:49629/149‑1 (MQ=255)
                                                                                                                                 aTCAACGCCTGGTTGTTGACGGGCTTGGGCGGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTGAc             >  1:33340/1‑149 (MQ=255)
                                                                                                                                  tCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTGAc             >  7:239498/1‑148 (MQ=255)
                                                                                                                                  tCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTGAc             <  4:226283/148‑1 (MQ=255)
                                                                                                                                    aaCGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCttt                                                             <  6:371183/98‑1 (MQ=255)
                                                                                                                                    aaCGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCttt                                                             >  5:371183/1‑98 (MQ=255)
                                                                                                                                         atgaaccgctACGGGCTTGGCCTGGCGCGGCCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTGACGAAGcgcc     <  5:13459‑M1/139‑1 (MQ=255)
                                                                                                                                            gttgttGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATCCCTTTGGCGAACATTGTGTGCACGAAGTGGTCGTAGGAGTCGGACTCGTTGACGAAGCgccgcc  >  7:96719/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                             
GCGTGGTCGATGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTGACGAAGCGCCGCC  >  NC_002947/2980998‑2981286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.