| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3005851 = | 62 (1.030) | 3 (0.050) | 3/254 | NT | 5.3% | coding (2432/3621 nt) | PP_2627 | membrane protein |
| ? | NC_002947 | 3005896 = | 49 (0.850) | coding (2477/3621 nt) | PP_2627 | membrane protein | |||||
AACGCTTGCTGTTGCTCGGGTTTTCCGGTTGCTACGCGCAGCGTACTCAGCTCACCCGATGCTTCAACAGCTGCTGGAGGCGCAAGCGAGGTGTTATCCCTGACCGTATCCAGCAGCCGTTGCAATGGTGCTGCGGGGCCGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3005995‑3005851‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcaGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCGTTTGCAGGCCTTGGCGCCATGCTGCAGGC > NC_002947/3005896‑3006040 AACGCTTGCTGTTGCTCGGGTTTTCCGGTTGCTACGCGCAGCGTACTCAGCTCACCCGATGCTTCAACAGCTGCTGGAGGCGCAAGCGAGGTGTTATCCCTGACCGTATCCAGCAGCCGTTGCAATGGTGCTGCGGGGCCGGTCAcctg > 6:262634/1‑145 CCCTGACCGTATCCAGCAGCCGTTGCAATGGTGCTGCGGGGCCGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGA > 5:300812/1‑133 CCCTGACCGTATCCAGCAGCCGTTGCAATGGTGCTGCGGGGCCGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGA < 6:300812/133‑1 CCTGACCGTATCCAGCAGCCGTTGCAATGGTGCTGCGGGGCCGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGG > 6:378745/1‑149 GGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGTCATCCAGCGGGCGTTTGCAGGCCTTGGCGCCATGCTGCAGG > 1:29684/1‑149 GGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCGTTTGCAGGCCTTGGCGCCATGCTGCAGG > 4:21014/1‑149 GTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCGTTTGCAGGCCTTGGCGCCATGCTGCAGGC > 1:332163/1‑149 GTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCGTTTGCAGGCCTTGGCGCCATGCTGCAGGC < 5:6481/149‑1 AACGCTTGCTGTTGCTCGGGTTTTCCGGTTGCTACGCGCAGCGTACTCAGCTCACCCGATGCTTCAACAGCTGCTGGAGGCGCAAGCGAGGTGTTATCCCTGACCGTATCCAGCAGCCGTTGCAATGGTGCTGCGGGGCCGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3005995‑3005851‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcaGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCGTTTGCAGGCCTTGGCGCCATGCTGCAGGC > NC_002947/3005896‑3006040 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |