New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3005851 =62 (1.030)3 (0.050) 3/254 NT 5.3% coding (2432/3621 nt) PP_2627 membrane protein
?NC_002947 3005896 = 49 (0.850)coding (2477/3621 nt) PP_2627 membrane protein

CTCTACAGCGCCGATTACATTGACAGCTGGCGGCGCGCCCTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCGTTTGCAGGCCTTGGCGCCATGCTGCAGGC  >  NC_002947/3005748‑3006040
                                                                                                                                                       |                                                                                                                                                
ctctACAGCGCCGATTACATTGACAGCTGGCGGCGCGCCCTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAg                                                                                                                                                  >  8:30160/1‑149 (MQ=255)
 ccaacgcttgctgttgctcgggttttccggttgctacgcgcagcgtactcagctcacccgatgcttcaacagctgctggaggcgcaagcgaggtgttatcccTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAgg                                                                                                                                                 >  6:378745‑M1/103‑149 (MQ=255)
   tACAGCGCCGATTACATTGACAGCTGGCGGCGCGCCCTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAgg                                                                                                                                                 <  5:253024/147‑1 (MQ=255)
      aGCGCCGATTACATTGACAGCTGGCGGCGCGCCCTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATaa                                                                                                                                            <  8:104259/149‑1 (MQ=255)
        cgcCGATTACATTGACAGCTGGCGGCGCGCCCTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAaca                                                                                                                                          <  7:334457/149‑1 (MQ=255)
               tACATTGACAGCTGGCGGCGCGCCCTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGC‑‑TACGGTCAGGGATAACACCTCGCt                                                                                                                                   >  8:180519/1‑149 (MQ=255)
                 cATTGACAGCTGGCGGCGCGCCCTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCtt                                                                                                                                  <  3:16157/148‑1 (MQ=255)
                  tcgggttttccggttgctacgcgcagcgtactcagctcacccgatgcttcaacagctgctggaggcgcaagcgaggtgttatcccTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAggg                                                                                                                                                <  6:300812‑M1/48‑1 (MQ=255)
                  tcgggttttccggttgctacgcgcagcgtactcagctcacccgatgcttcaacagctgctggaggcgcaagcgaggtgttatcccTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAggg                                                                                                                                                >  5:300812‑M1/86‑133 (MQ=255)
                  aTTGACAGCTGGCGGCGCGCCCTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTgc                                                                                                                                >  6:167356/1‑149 (MQ=255)
                  aTTGACAGCTGGCGGCGCGCCCTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTgc                                                                                                                                <  7:30160/149‑1 (MQ=255)
                    tGACAGCTGGCGGCGCGCCCTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTgcgc                                                                                                                              >  2:199245/1‑149 (MQ=255)
                     gACAGCTGGCGGCGCGCCCTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGGGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCGGGA‑‑TACGGTCAGGGATACCACCTCGCTTgcgc                                                                                                                              <  4:287696/148‑1 (MQ=255)
                     gACAGCTGGCGGAGCGCGCTGACCGCATTTACGGTGGCTGACTTCCGTGATCTGGACCATGCTGTCGCGTTCGTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTgcgc                                                                                                                              <  4:282669/148‑1 (MQ=255)
                      aCAGCTGGCGGCGCGCCCTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCt                                                                                                                            >  5:306127/1‑149 (MQ=255)
                       cAGCTGGCGGCGCGCCCTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTc                                                                                                                           <  4:358381/149‑1 (MQ=255)
                                 cgcgcCCTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGt                                                                                                                 <  1:359672/149‑1 (MQ=255)
                                  gcgcCCTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGtt                                                                                                                <  6:306127/149‑1 (MQ=255)
                                     cccTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTg                                                                                                               >  2:107137/1‑147 (MQ=255)
                                     cccTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGGTGaa                                                                                                             <  5:260672/149‑1 (MQ=255)
                                      ccTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCcagcag                                                                                                                     <  1:96935/140‑1 (MQ=255)
                                      ccTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCcagcag                                                                                                                     >  2:96935/1‑140 (MQ=255)
                                        tGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATCTGCAACGGCTGCTGGA‑‑TACGGTCAgg                                                                                                                                                 <  1:194782/111‑1 (MQ=255)
                                        tGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAgg                                                                                                                                                 >  2:194782/1‑110 (MQ=255)
                                            cGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCgg                                                                                                      <  8:74300/149‑1 (MQ=255)
                                            cGCTTGTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCgg                                                                                                      <  4:308618/149‑1 (MQ=255)
                                              cTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGt                                                                                                    <  1:26018/149‑1 (MQ=255)
                                               ttttACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGt                                                                                                    >  1:243848/1‑148 (MQ=255)
                                                    cGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCt                                                                                               <  4:19713/148‑1 (MQ=255)
                                                     ggTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGATCTACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCt                                                                                               <  1:107137/149‑1 (MQ=255)
                                                         gCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTAc                                                                                         <  2:243848/149‑1 (MQ=255)
                                                           tGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGCTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGc                                                                                       >  5:176055/1‑149 (MQ=255)
                                                               ttCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTgcg                                                                                   >  7:77806/1‑149 (MQ=255)
                                                               ttCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTgcg                                                                                   >  5:262634/1‑149 (MQ=255)
                                                                   gTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTa                                                                               <  3:195833/149‑1 (MQ=255)
                                                                   gTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTa                                                                               <  2:15712/149‑1 (MQ=255)
                                                                   gTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTa                                                                               <  2:324652/149‑1 (MQ=255)
                                                                           gACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAAc                                                                          <  1:199245/146‑1 (MQ=255)
                                                                              cATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGaa                                                                     >  6:6481/1‑148 (MQ=255)
                                                                              cATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGaa                                                                     >  4:296919/1‑148 (MQ=255)
                                                                                tGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACTGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAACAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAAc                                                                  >  6:158249/1‑149 (MQ=255)
                                                                                  gtctCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGGCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAAccc                                                                <  4:258816/146‑1 (MQ=255)
                                                                                     tCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGa                                                              <  5:167356/148‑1 (MQ=255)
                                                                                       gcgATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGc                                                            >  7:208236/1‑148 (MQ=255)
                                                                                       gcgATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGc                                                            >  2:238969/1‑148 (MQ=255)
                                                                                       gcgATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGc                                                            <  6:183215/148‑1 (MQ=255)
                                                                                         gATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAAc                                                         <  8:208236/149‑1 (MQ=255)
                                                                                           tCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAg                                                       >  5:75447/1‑149 (MQ=255)
                                                                                                   caggTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGtt                                               >  6:262634‑M1/5‑149 (MQ=255)
                                                                                                     gTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTgg                                             >  6:266761/1‑149 (MQ=255)
                                                                                                       ccctgaccgtatccagcagccgttgcaatggtgctgcggggccggtcaGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGa                                                              <  6:300812‑M2/85‑1 (MQ=255)
                                                                                                       ccctgaccgtatccagcagccgttgcaatggtgctgcggggccggtcaGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGa                                                              >  5:300812‑M2/49‑133 (MQ=255)
                                                                                                        cctgaccgtatccagcagccgttgcaatggtgctgcggggccggtcaGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTgg                                             >  6:378745‑M2/48‑149 (MQ=255)
                                                                                                                ccGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCgg                                  <  5:266761/149‑1 (MQ=255)
                                                                                                                   cagcaCCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCg                               >  2:202448/1‑149 (MQ=255)
                                                                                                                      caCCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCGttt                            <  8:77806/149‑1 (MQ=255)
                                                                                                                           ttGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCGTTTGCAgg                       <  1:238969/149‑1 (MQ=255)
                                                                                                                                        ctgGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCGTTTGCAGGCCTTGGCGCCAt           >  7:338716/1‑149 (MQ=255)
                                                                                                                                         tgGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCGTTTGCAGGCCTTGGCGCCAtg          >  2:171495/1‑149 (MQ=255)
                                                                                                                                         tgGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCGTTTGCAGGCCTTGGCGCCAtg          >  5:78772/1‑149 (MQ=255)
                                                                                                                                           gA‑‑TACGGGCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCGTTTGCAGGCCTTGGCGCCAtgct        <  5:288556/149‑1 (MQ=255)
                                                                                                                                                  ggtcaGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGTCATCCAGCGGGCGTTTGCAGGCCTTGGCGCCATGCTGCAgg   >  1:29684‑M2/6‑149 (MQ=255)
                                                                                                                                                  ggtcaGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCGTTTGCAGGCCTTGGCGCCATGCTGCAgg   >  4:21014‑M2/6‑149 (MQ=255)
                                                                                                                                                   gtcaGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCGTTTGCAGGCCTTGGCGCCATGCTGCAGGc  >  1:332163‑M2/5‑149 (MQ=255)
                                                                                                                                                   gtcaGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCGTTTGCAGGCCTTGGCGCCATGCTGCAGGc  <  5:6481‑M2/145‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                
CTCTACAGCGCCGATTACATTGACAGCTGGCGGCGCGCCCTGACCGCTTTTACGGTGGCTGACTTCCGTGATCTGGACCATGGTGTCGCGATCCTGGAGCAGTTGACCGGCCCCGCAGCACCATTGCAACGGCTGCTGGA‑‑TACGGTCAGGGATAACACCTCGCTTGCGCCTCCAGCAGCTGTTGAAGCATCGGGTGAGCTGAGTACGCTGCGCGTAGCAACCGGAAAACCCGAGCAACAGCAAGCGTTGGCCATCCAGCGGGCGTTTGCAGGCCTTGGCGCCATGCTGCAGGC  >  NC_002947/3005748‑3006040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.