| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3101513 = | 30 (0.500) | 4 (0.070) | 4/254 | NT | 10.7% | coding (147/807 nt) | PP_2711 | short‑chain dehydrogenase/reductase family oxidoreductase |
| ? | NC_002947 | 3101562 = | 38 (0.660) | coding (196/807 nt) | PP_2711 | short‑chain dehydrogenase/reductase family oxidoreductase | |||||
ACTCATCCAGCTGGTCGAGCAGAGCGAAGCGATTCACGCCAGCAGCGTTGATCAGCACATTCACAGCCCCCATCTCGCGTGCCCGCTCGATGACCTGTTCGCGCCCTGACGGGCTGCGCAGGTCGGCCTCCTGCCAGCGCAGACGATCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3101664‑3101513‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagggCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGCGTTGGACGAGCTATTGGACATCAACCTGAAGGCTCCCCTG > NC_002947/3101562‑3101708 ACTCATCCAGCTGGTCGAGCAGAGCGAAGCGATTCACGCCAGCAGCGTTGATCAGCACATTCACAGCCCCCATCTCGCGTGCCCGCTCGATGACCTGTTCGCGCCCTGACGGGCTGCGCAGGTCGGCCTCCTGCCAGCGCAGACGAT > 3:365339/1‑147ACTCATCCAGCTGGTCGAGCACAGCGAAGCGATTCACGCCAGCAGCGTTGATCAGCACATTCACAGCCCCCATCTCGCATGCCCGCTCGATGACCTGTTCCCCCCCTGACGGGCTGCGCAGGTCGGCCTCCTGCCAGCGCAGACGAT > 3:40318/1‑147 CTCATCCAGCTGGTCGAGCAGAGCGAAGCGATTCACGCCAGCAGCGTTGATCAGCACATTCACAGCCCCCATCTCGCGTGCCCGCTCGATGACCTGTTCGCGCCCTGACGGGCTGCGCAGGTCGGCCTCCTGCCAGCGCAGACGATCAG < 2:100292/149‑1 ATCCAGCTGGTCTAGCAGAGCGAAGCGATTCACGCCAGCAGCGTTGATCAGCAGAATCACAGCCCCCATCTCGCGTGCCCGCTCGATTACCTGTTCGCGCCCTGACGGGCTGCGCAGGTCGGCCTCCTGCCAGCGCAGACGATCAGG < 2:289727/147‑1 ATCCAGCTGGTCGAGCAGAGCGAAGCGATTCACGCCAGCAGCGTTGATCAGCACATTCACAGCCCCCATCTCGCGTGCCCGCTCGATGACCTGTTCGCGCCCTGACGGGCTGCGCAGGTCGGCCTCCTGCCAGCGCAGCCGATCAGGG > 7:173051/1‑148 ATCCAGCTGGTCGAGCAGAGCGAAGCGATTCACGCCAGCAGCGTTGATCAGCACATTCACAGCCCCCATCTCGCGTGCCCGCTCGATGACCTGTTCGCGCCCTGACGGGCTGCGCAGGTCGGCCTCCTGCCAGCGCAGACGATCAGG < 4:166200/147‑1 CGCCCTGACGGGCTGCGCAGGTCGGCCTCCTGCCAGCGCAGACGATCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGA < 1:181664/103‑1 CGCCCTGACGGGCTGCGCAGGTCGGCCTCCTGCCAGCGCAGACGATCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGA > 2:181664/1‑103 CCCTGACGGGCTGCGCAGGTCGGCCTCCTGCCAGCGCAGACGATCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGAT > 7:212322/1‑148 CCTGACGGGCTGCGCAGGTCGGCCTCCTGCCAGCGCAGACGATCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGAT > 1:257641/1‑147 GGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGCGTTGGACGAGCTATTGGACATCAACCTGAAGGCTCCCCTG < 5:237206/149‑1 ACTCATCCAGCTGGTCGAGCAGAGCGAAGCGATTCACGCCAGCAGCGTTGATCAGCACATTCACAGCCCCCATCTCGCGTGCCCGCTCGATGACCTGTTCGCGCCCTGACGGGCTGCGCAGGTCGGCCTCCTGCCAGCGCAGACGATCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3101664‑3101513‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagggCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGCGTTGGACGAGCTATTGGACATCAACCTGAAGGCTCCCCTG > NC_002947/3101562‑3101708 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |