New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3101513 =30 (0.500)4 (0.070) 4/254 NT 10.7% coding (147/807 nt) PP_2711 short‑chain dehydrogenase/reductase family oxidoreductase
?NC_002947 3101562 = 38 (0.660)coding (196/807 nt) PP_2711 short‑chain dehydrogenase/reductase family oxidoreductase

CATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGAT  >  NC_002947/3101366‑3101660
                                                                                                                                                   |                                                                                                                                                   
caggggagccttcaggttgatgtccaatagctcgtccaacgcatactcatccagctggtcgagcagagcgaagcgattcacgccagcagcgttgatcagcacattcacagcccccatctcgcgtgcccgctcgatgacctgttcgcgcc                                                                                                                                                    <  5:237206‑M1/2‑1 (MQ=255)
cATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCACGCTGGCTGGCCTGATGAACCGGTAcc                                                                                                                                                    >  8:173051/1‑149 (MQ=255)
 aTGCGTTTGGCTGAGTCCGTGGTGCTCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTAccc                                                                                                                                                   <  2:58381/149‑1 (MQ=255)
                               acgtcggcCATTGGGGGCATAGGCCTTGTATTGGCTGAACAGGTCTGCGCTGCCGTTGCCCAGGTGTTGGCCGTCATTCGGCATATGGGCAAGCTGGGTGGCCTGATGAACCGGTACCCTGATCGTCTGCGGTGGCAGGAGGCCGAc                                                                                                                       <  5:113672/141‑1 (MQ=255)
                                ccGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTg                                                                                                                    >  4:349888/1‑149 (MQ=255)
                                         gTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCg                                                                                                           >  2:209352/1‑149 (MQ=255)
                                                cATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGgc                                                                                                    <  1:209352/149‑1 (MQ=255)
                                                atccagctggtcgagcagagcgaagcgattcacgccagcagcgttgatcagcacattcacagcccccatctcgcgtgcccgctcgatgacctgttcgcgCCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAggg                                                                                                     >  7:212322‑M1/100‑148 (MQ=255)
                                                atccagctggtcgagcagagcgaagcgattcacgccagcagcgttgatcagcacattcacagcccccatctcgcgtgcccgctcgatgacctgttcgcgCCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAgg                                                                                                      >  1:257641‑M1/100‑147 (MQ=255)
                                                       cTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCAACCTGCGCAGCCCGTCAGGGCGCGaa                                                                                               >  4:40318/1‑147 (MQ=255)
                                                         ggAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAgg                                                                                           <  1:332955/149‑1 (MQ=255)
                                                                gCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATc                                                                                      >  3:26937/1‑147 (MQ=255)
                                                                gCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGa                                                                                    <  7:54758/149‑1 (MQ=255)
                                                                    aaCAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGc                                                                                  <  4:26937/147‑1 (MQ=255)
                                                                          tctGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCAcgc                                                                          >  1:250991/1‑149 (MQ=255)
                                                                                     ggTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCga                                                                        <  6:269598/140‑1 (MQ=255)
                                                                                     ggTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCga                                                                        >  5:269598/1‑140 (MQ=255)
                                                                                               tcagcacattcacagcccccatctcgcgtgcccgctcgatgacctgttcgcgCCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGgcg                                                                                                   <  1:181664‑M1/51‑1 (MQ=255)
                                                                                               tcagcacattcacagcccccatctcgcgtgcccgctcgatgacctgttcgcgCCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGgcg                                                                                                   >  2:181664‑M1/53‑103 (MQ=255)
                                                                                                    gCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGAt                                                <  3:349888/149‑1 (MQ=255)
                                                                                                      cGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATc                                               >  1:139993/1‑148 (MQ=255)
                                                                                                            tCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACgctg                                        >  1:157513/1‑149 (MQ=255)
                                                                                                            tCGGCATAGGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACgctg                                        <  8:204693/149‑1 (MQ=255)
                                                                                                              ggCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGAAGGGGGCTGTGAATGTGCTGATCACAgctgct                                      >  1:91114/1‑149 (MQ=255)
                                                                                                               gCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGctgctg                                     >  8:315545/1‑149 (MQ=255)
                                                                                                                 atatGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAAtgtg                                                     <  7:290108/131‑1 (MQ=255)
                                                                                                                 atatGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAAtgtg                                                     >  8:290108/1‑131 (MQ=255)
                                                                                                                     gggCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTg                                >  4:24917/1‑148 (MQ=255)
                                                                                                                      ggCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGaa                              >  6:316325/1‑149 (MQ=255)
                                                                                                                        cAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAAtc                            <  3:141295/149‑1 (MQ=255)
                                                                                                                         aaGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAAtcg                           >  3:78059/1‑149 (MQ=255)
                                                                                                                                   gcCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACATGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGctct                  <  2:250991/148‑1 (MQ=255)
                                                                                                                                   gcCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTg                 >  4:365339/1‑149 (MQ=255)
                                                                                                                                      tgatgaAACGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGAAGCCCGTCAGGGCGCGAACAGGTCATCTAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTCCATCGCTTCGCTCTGCTc              >  5:53751/1‑149 (MQ=255)
                                                                                                                                       gatgaACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTc              >  5:364211/1‑148 (MQ=255)
                                                                                                                                           aaCCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGAc           >  6:374772/1‑147 (MQ=255)
                                                                                                                                             ccGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGc       >  6:237206/1‑149 (MQ=255)
                                                                                                                                                 tACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGa   <  6:364211/149‑1 (MQ=255)
                                                                                                                                                   CCCTGATCGGCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGAt  >  7:173051‑M1/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CATGCGTTTGGCTGAGTCCGTGGTGATCCTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTGCGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGAT  >  NC_002947/3101366‑3101660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.