New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3297037 =	50 (0.830)	4 (0.070)	4/256	NT	8.0%	coding (45/189 nt)	PP_2899	hypothetical protein
	?	NC_002947	3297072 =	44 (0.760)					coding (80/189 nt)	PP_2899	hypothetical protein

TCTGCAGGTGGGACAGGCCCAGCATCAGGCCCAGTACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3297077‑3297037 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccTGCAGAAGCAGGGCACGATCAGTGAGCAGACCTTCCAGATGCTGGCCATCGCCATTGCCGTGGTGGTCGTGGTGATCAACGGCATTCTGCGGCGCAAGGTCAAGCCCTGATCTGCGCGGGCCGGCCAGGTATGGCCGGCCATGCGCT  >  NC_002947/3297072‑3297218                                                                                                                                                                                              TCTGCAGGTGGGACAGGCCCAGCATCAGGCCCAGTACCACCTGCAGAAGCAGGGCACGATCAGTGAGCAGACCTTCCAGATGCTGGCCATCGCCATTGCCGTGGTGGTCGTGGTGATCAACGGCATTCTGCGGCGCAAGGTCAAGCCCT                                         >  1:220564/1‑149            GACAGGCCCAGCATCAGGCCCAGTACCACCTGCAGAAGCAGGGCACGATCAGT                                                                                                                              >  3:231356/1‑53            GACAGGCCCAGCATCAGGCCCAGTACCACCTGCAGAAGCAGGGCACGATCAGT                                                                                                                              <  4:231356/53‑1                     AGCATCAGGCCCAGTACCACCTGCAGAAGCAGGGCACGATCAGTGAGCAGACCTTCCAGATGCTGGCCATCGCCATTGCCGTGGTGGTCGTGGTGATCAACGGCATTCTGCGGCGCAAGGTCAAGCCCTGATCTGCGCGGGCCGGCCAG                     <  2:220564/149‑1                                     CCACCTGCAGAAGCAGGGCACGATCAGTGAGCAGCCCTTCCAGATGCTGGCCATCGCCATTGCCGTGGTGGTCGTGGTGATCAACGGCATTCTGCGGCGCAAGGTCAAGCCCTGATCTGCGCGGGCCGGCCAGGTATGGCCGGCCATGC     >  1:221071/1‑149                                         CTGCAGAAGCAGGGCACGATCAGTGAGCAGACCTTCCAGATGCTGGCCATCGCCATTGCCGTGGTGGTCGTGGTGATCAACGGCATTCTGCGGCGCAAGGTCAAGCCCTGATCTGCGCGGGCCGGCCAGGTATGGCCGGCCATGCGCT  >  1:360753/1‑148                                                                                                                                                                                              TCTGCAGGTGGGACAGGCCCAGCATCAGGCCCAGTACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3297077‑3297037 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccTGCAGAAGCAGGGCACGATCAGTGAGCAGACCTTCCAGATGCTGGCCATCGCCATTGCCGTGGTGGTCGTGGTGATCAACGGCATTCTGCGGCGCAAGGTCAAGCCCTGATCTGCGCGGGCCGGCCAGGTATGGCCGGCCATGCGCT  >  NC_002947/3297072‑3297218

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.