| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3474666 = | 65 (1.080) | 3 (0.050) | 3/246 | NT | 5.3% | coding (2047/2517 nt) | PP_3087 | excinuclease ABC subunit A |
| ? | NC_002947 | 3474759 = | 47 (0.850) | coding (1954/2517 nt) | PP_3087 | excinuclease ABC subunit A | |||||
TTCAACGTTGCCAAGGGCCGGTGCGCCAACTGCGAGGGAGAGGGTTTCGTCAGCGTCGAGCTGCTGTTCATGCCCAGCGTGTACGCGCCCTGCCCGACCTGCCAGGGTGCCCGCTACAACCCCGAAACCCTGGCGGTGAGCTGGCAAGGCATGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3474822‑3474666‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatgaacaGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAACAGGC > NC_002947/3474759‑3474902 TTCAACGTTGCCAAGGGCCGGTGCGCCAACTGCGAGGGAGAGGGTTTCGTCAGCGTCGAGCTGCTGTTCATGCCCAGCGTGTACGCGCCCTGCCCGACCTGCCAGGGTGCCCGCTACAACCCCGAAACCCTGGCGGTGAGCTGGCAAGG > 2:265214/1‑149TTCAACGTTGCCAAGGGCCGGTGCGCCAACTGCGAGGGAGAGGGTTTCGTCAGCGTCGAGCTGCTGTTCATGCCCAGCGTGTACGCGCCCTGCCCGACCTGCCAGGGTGCCCGCTACAACCCCGAAACCCTGGCGGTGAGCTGGCAAGG > 5:98730/1‑149 CAACGTTGCCAATGGCCGGTGCGCCAACTGCGAGGGAGAGGGTTTCGTCAGCGTCGAGCTGCTGTTCATGCCCAGCGTGTACGCGCCCTGCCCGACCTGCCAGGGTGCCCGCTACAACCCCGAAACCCTGGCGGTGAGCTGGCAAGG < 7:107945/147‑1 GCTGTTCATGCCCAGCGTGTACGCGCCCTGCCCGACCTGCCAGGGTGCCCGCTACAACCCCGAAACCCTGGCGGTGAGCTGGCAAGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGG > 5:338943/1‑149 TTCATGCCCAGCGTGTACGCGCCCTGCCCGACCTGCCAGGGTGCCCGCTACAACCCCGAAACCCTGGCGGTGAGCTGGCAAGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAAC > 3:18014/1‑149 CTGCCCGACCTGCCAGGGTGCCCGCTACAACCCCGAAACCCTGGCGGTGAGCTGGCAAGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGT < 4:18014/149‑1 GGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAG‑CCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAAC < 1:48601/149‑1 CATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAACA < 6:338943/149‑1 CATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA > 5:381083/1‑147 CATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCACGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA > 1:65418/1‑147 ATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAACAG < 1:192584/149‑1 AACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAACAGGC < 6:381083/148‑1 TTCAACGTTGCCAAGGGCCGGTGCGCCAACTGCGAGGGAGAGGGTTTCGTCAGCGTCGAGCTGCTGTTCATGCCCAGCGTGTACGCGCCCTGCCCGACCTGCCAGGGTGCCCGCTACAACCCCGAAACCCTGGCGGTGAGCTGGCAAGGCATGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3474822‑3474666‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatgaacaGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAACAGGC > NC_002947/3474759‑3474902 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |