New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3474666 =65 (1.080)3 (0.050) 3/246 NT 5.3% coding (2047/2517 nt) PP_3087 excinuclease ABC subunit A
?NC_002947 3474759 = 47 (0.850)coding (1954/2517 nt) PP_3087 excinuclease ABC subunit A

GCTCGGCAAAAACCTGCAGGGCCTGGTCGACGGTCAACTGCAGCACTTGCGCGATGTTCATGCCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAACAGGCCTGTG  >  NC_002947/3474612‑3474907
                                                                                                                                                   |                                                                                                                                                      
gCTCGGCAAAAACCTGCAGGGCCTGGTCGACGGTCAACTGCAGCACTTGCGCGATGTTCATGCCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAAcag                                                                                                                                                        <  2:40764/148‑1 (MQ=255)
ccaagggccggtgcgccaactgcgagggagagggtttcgtcagcgtcgagctgcTGTTCATGCCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAAcagc                                                                                                                                                       >  5:338943‑M1/55‑149 (MQ=255)
 cTCGGCAAAAACCTGCAGGGCCTGGTCGACGGTCAACTGCAGCACTTGCGCGATGTTCATGCCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAAcagc                                                                                                                                                       <  7:168722/148‑1 (MQ=255)
  tCGGCAAAAACCTGCAGGGCCTGGTCGACGGTCAACTGCAGCACTTGCGCGATGTTCATGCCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAAcagcag                                                                                                                                                     >  6:98730/1‑149 (MQ=255)
      cAAAAACCTGCAGGGCCTGGTCGACGGTCAACTGCAGCACTTGCGCGATGTTCATGCCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCg                                                                                                                                                 <  3:33693/149‑1 (MQ=255)
                  gggCCTGGTCGACGGTCAACTGCAGCACTTGCGCGATGTTCATGCCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGaaa                                                                                                                                     <  7:239969/149‑1 (MQ=255)
                     ccTGGTCGACGGTCAACTGCAGCACTTGCGCGATGTTCATGCCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAAccc                                                                                                                                  >  2:57444/1‑149 (MQ=255)
                      cTGGTCGAAGGTCAACTGCAGCACTTGCGCGATGTTCATGCCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCct                                                                                                                                 >  7:228941/1‑149 (MQ=255)
                        ggTCGACGGTCAACTGCCGCACTTGCGCGATGTTCATGCCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCctct                                                                                                                               <  4:137772/149‑1 (MQ=255)
                         gTCGACGGTCAACTGCAGCACTTGCGCGATGTTCATGCCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCCCCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCtctc                                                                                                                              >  2:192584/1‑149 (MQ=255)
                             aCGGTCAACTGCAGCACTTGCGCGATGTTCATGCCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTc                                                                                                                          >  1:106242/1‑149 (MQ=255)
                                        cagcaCTTGCGCGATGTTCATGCCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGCGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGgc                                                                                                                 <  7:197238/147‑1 (MQ=255)
                                          gcaCTTGCGCGATGTTCATGCCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGTCGAGTACACGCAGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑c                                                                                                           >  2:26146/1‑149 (MQ=255)
                                             cTTGCGCGATGTTCATGCCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCgg                                                                                                        >  5:192184/1‑149 (MQ=255)
                                                    gctgttcatgcccagcgtgtacgcgccctgcccgacctgccagggtgcccgctacaaccccgaaaccctggcggtgagctggcaaggcatgaacaGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTgg                                                                                                 >  5:338943‑M2/96‑149 (MQ=255)
                                                        ttcatgcccagcgtgtacgcgccctgcccgacctgccagggtgcccgctacaaccccgaaaccctggcggtgagctggcaaggcatgaacaGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAAc                                                                                             >  3:18014‑M2/92‑149 (MQ=255)
                                                              CCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGaa                                                                                       >  5:98730‑M1/1‑149 (MQ=255)
                                                              CCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGaa                                                                                       >  2:265214‑M1/1‑149 (MQ=255)
                                                              CCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCATTGGCAACGTTg                                                                                         <  7:107945‑M1/147‑1 (MQ=255)
                                                                ttGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCctc                                                                                                                                <  6:53133/108‑1 (MQ=255)
                                                                ttGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCctc                                                                                                                                >  5:53133/1‑108 (MQ=255)
                                                                ttGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCctc                                                                                                                                >  1:324781/1‑108 (MQ=255)
                                                                ttGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCctc                                                                                                                                <  2:324781/108‑1 (MQ=255)
                                                                ttGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑GCGGCCCTTGGCAACGTTGAAg                                                                                      >  8:319417/1‑148 (MQ=255)
                                                                ttGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAg                                                                                      >  8:78424/1‑148 (MQ=255)
                                                                ttGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAg                                                                                      >  1:127152/1‑148 (MQ=255)
                                                                ttGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAg                                                                                      >  3:27094/1‑148 (MQ=255)
                                                                      gCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAgc                                                                               <  6:344084/149‑1 (MQ=255)
                                                                        tCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGtt                                                                                          <  1:238511/136‑1 (MQ=255)
                                                                        tCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGtt                                                                                          >  2:238511/1‑136 (MQ=255)
                                                                        tCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAgcgc                                                                             >  1:244764/1‑149 (MQ=255)
                                                                          aCCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAgcgc                                                                             >  1:242879/1‑147 (MQ=255)
                                                                          aCCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAgcgc                                                                             <  2:242879/147‑1 (MQ=255)
                                                                              ccAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCg                                                                       >  3:70922/1‑149 (MQ=255)
                                                                              ccAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCg                                                                       >  6:99931/1‑149 (MQ=255)
                                                                              ccAGGGTTTCGGGGTTGTAGCGGGCAACCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTAGCAGTTGGCGCA‑‑CCGGCCCTTTGCAACGTTGAAGGAAAAGCGCCCGGCg                                                                       >  3:194300/1‑149 (MQ=255)
                                                                               ctgcccgacctgccagggtgcccgctacaaccccgaaaccctggcggtgagctggcaaggcatgaacaGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGt                                                                      <  4:18014‑M2/81‑1 (MQ=255)
                                                                               cAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGt                                                                      <  5:99931/149‑1 (MQ=255)
                                                                                   gTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGaa                                                                  <  6:192184/149‑1 (MQ=255)
                                                                                   gTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGaa                                                                  >  2:48601/1‑149 (MQ=255)
                                                                                      tCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGCCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGATGGAGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGc                                                                >  4:275336/1‑148 (MQ=255)
                                                                                          ggTTGTAGCGGGCACCCTGGCAGGTCTGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCTCA‑‑CCGTCCCTTTGCAACGTTGAAGGAAAAGCGCCCGGCGTCTAAGCCCtgt                                                           <  8:228941/149‑1 (MQ=255)
                                                                                          ggTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCtgt                                                           <  1:149760/149‑1 (MQ=255)
                                                                                          ggTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCtgt                                                           <  7:78424/149‑1 (MQ=255)
                                                                                             tGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGcc                                                        >  3:312985/1‑149 (MQ=255)
                                                                                               tAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCtt                                                      <  2:106242/149‑1 (MQ=255)
                                                                                               tAGCGGGCACCCGGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCtt                                                      <  6:193544/149‑1 (MQ=255)
                                                                                                 gCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTg                                                     <  2:244764/148‑1 (MQ=255)
                                                                                                          cTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCCCTGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTc                                             <  1:294019/149‑1 (MQ=255)
                                                                                                           tGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCgg                                           >  2:260180/1‑148 (MQ=255)
                                                                                                             tgaGGTCGGGCAGGGCGCGTACTCGCTTGGCTTGTACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCTGCGCTTGGCAACTTTTAAGGAAAAGAGCCCGGCGTCGAAGCCCTGTGCCTTTTCCTGCTCGGTa                                         <  4:194300/146‑1 (MQ=255)
                                                                                                                   cGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGa                                  <  7:319417/149‑1 (MQ=255)
                                                                                                                        aGGGCGCGTACACGCTGGGCATGACCAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCAt                             >  5:376444/1‑149 (MQ=255)
                                                                                                                        aGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGTGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCAt                             >  5:139488/1‑149 (MQ=255)
                                                                                                                            cgcgTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTgc                         <  4:70922/149‑1 (MQ=255)
                                                                                                                                tACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCAc                     <  4:27094/149‑1 (MQ=255)
                                                                                                                                 acacGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACg                    >  6:298080/1‑149 (MQ=255)
                                                                                                                                    cGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTACTCGGTAGCCGCGAAGCATTTGCGCACGTgg                 >  6:60034/1‑149 (MQ=255)
                                                                                                                                         ggcatgaacaGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAAc           <  1:48601‑M2/139‑1 (MQ=255)
                                                                                                                                           catgaacaGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGaa            >  5:381083‑M2/9‑147 (MQ=255)
                                                                                                                                           catgaacaGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAACa          <  6:338943‑M2/141‑1 (MQ=255)
                                                                                                                                           catgaacaGCAGCTCGACGCTGACGAAACCCTCTCCCACGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGaa            >  1:65418‑M2/9‑147 (MQ=255)
                                                                                                                                            atgaacaGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAACAg         <  1:192584‑M2/142‑1 (MQ=255)
                                                                                                                                               aacaGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAACAGGc       <  6:381083‑M2/144‑1 (MQ=255)
                                                                                                                                                   gcagcTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAACAGGCCtgtg  >  3:98170/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                      
GCTCGGCAAAAACCTGCAGGGCCTGGTCGACGGTCAACTGCAGCACTTGCGCGATGTTCATGCCTTGCCAGCTCACCGCCAGGGTTTCGGGGTTGTAGCGGGCACCCTGGCAGGTCGGGCAGGGCGCGTACACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCA‑‑CCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAACAGGCCTGTG  >  NC_002947/3474612‑3474907

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.