New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3524566 =	NA (NA)	3 (0.050)	3/254	NT	NA	coding (1279/1533 nt)	PP_3114	transposase
	?	NC_002947	3524616 =	NA (NA)					coding (1329/1533 nt)	PP_3114	transposase

GGGCTCTTGGCCGTTGGCTTTGGCCGTCTCGACCAGGCTGTAAAGTTGCGCACTGGCCGTCGCCCCTCTGGGCGTGTCACTGAACAACCAGTTCTTTCTCCCGATGACAAACGGGCGGATCGCACGCTCGGCCGCGTTGTTGTCCATCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3524715‑3524566 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcggGAGAAAGAACTGGTTGTTCAGTGACACGCCCAGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCCAAGAGCCCTATGCGTGGCTGCGCCACGCACTAGAGCGCCTGCCGCAGGCGGCCTC  >  NC_002947/3524616‑3524762                                                                                                                                                                                                                                                                                                           GGGCTCTTGGCCGTTGGCTTTGGCCGTCTCGACCAGGCTGTAAAGTTGCGCACTGGCCGTCGCCCCTCTGGGCGTGTCACTGAACAACCAGTTCTTTCTCCCGATGACAAACGGGCGGATCGCACGCTCGGCCGCGTTGTTGTCCATCG                                                                                                                                                      <  8:111874/149‑1  GGCTCTTGGCCGTTGGCTTTGGCCGTCTCGACCAGGCTGTAAAGTTGCGCACTGGCCGTCGCCCCTCTGGGCGTGTCACTGCACAACCAGTTCTTTCTCCCGATGACAAACGGGCGGATCGCACGCTCGGCCGCGTTGTTGTCCATCGG                                                                                                                                                     >  3:246069/1‑149  GGCTCTTGGCCGTTGGCTTTGGCCGTCTCGACCAGGCTGTAAAGTTGCGCACTGGCCGTCGCCCCTCTGGGCGTGTCACTGAACAACCAGTTCTTTCTCCCGATGACAAACGGGCGGATCGCACGCTCGGCCGCGTTGTTGTCCATCGG                                                                                                                                                     >  1:134817/1‑149  GGCTCTTGGCCGTTGGCTTTGGCCGTCTCGACCAGGCTGTAAAGTTGCGCACTGGCCGTCGCCCCTCTGGGCGTGTCACTGAACAACCAGTTCTTTCTCCCGATGACAAACGGGCGGATCGCACGCTCGGCCGCGTTGTTGTCCATCGG                                                                                                                                                     >  6:368672/1‑149                                                                                                 TCTCCCGATGACAAACGGGCGGATCGCACGGTCGGCCGCGTTGTTGTCCATCGGGAGAAAGAACTGGTTGTTCAGTGACACGCCCAGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCC                                                         >  1:35079/1‑146                                                                                                   TCCCGATGACAAACGGGCGGATCGCACGCTCGGCCGCGTTGTTGTCCATCGGGAGAAAGAACTGGTTGTTCAGTGACACGCCCAGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCCAAGAG                                                    >  6:282918/1‑149                                                                                                               ACGGGCGGATCGCACGCTCGGCCGCGTTGTTGTCCATCGGGAGAAAGAACTGGTTGTTCAGTGACACGCCCAGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCCAAGAGCCCTATGCGTGG                                        <  5:282918/149‑1                                                                                                                                                 CATCGGGAGAAAGAACTGGTTGTTCAGTGACACGCCCAGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCCAAGAGCCCTATGCGTGGCTGCGCCACGCACTAGAGCGCCTGCCGCAGGCGG      >  1:6145/1‑149                                                                                                                                                 CATCGGGAGAAAGAACTGGTTGTTCAGTGACACGCCCAGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCCAAGAGCCCTATGCGTGGCTGCGCCACGCACTAGAGCGCCTGCCGCAGGCGG      >  1:68/1‑149                                                                                                                                                  ATCGGGAGAAAGAACTGGTTGTTCAGTGACACGCCCAGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCCAAGAGCCCTATGCGTGGCTGCGCCACGCACTAGAGCGCCTGCCGCAGGCGGC     >  1:154812/1‑149                                                                                                                                                  ATCGGGAGAAAGAACTGGTTGTTCAGTGACACGCCCAGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCCAAGAGCCCTATGCGTGGCTGCGCCACGCACTAGAGCGCCTGCCGCAGGCGGC     >  8:199794/1‑149                                                                                                                                                  ATCGGGAGAAAGAACTGGTTGTTCAGTGACACGCCCAGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCCAAGAGCCCTATGCGTGGCTGCGCCACGCACTAGAGCGCCTGCCGCAGGCGGC     >  4:201580/1‑149                                                                                                                                                  ATCGGGAGAAAGAACTGGTTGTTCAGTGACACGCCCAGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCCAAGAGCCCTATGCGTGGCTGCGCCACGCACTAGAGCGCCTGCCGCAGGCGGC     >  3:134755/1‑149                                                                                                                                                  ATCGGGAGAAAGAACTGGTTGTTCAGTGACACGCCCAGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCCAAGAGCCCTATGCGTGGCTGCGCCACGCACTAGA                       >  5:41697/1‑131                                                                                                                                                  ATCGGGAGAAAGAACTGGTTGTTCAGTGACACGCCCAGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCCAAGAGCCCTATGCGTGGCTGCGCCACGCACTAGA                       <  6:41697/131‑1                                                                                                                                                    CGGGAGAAAGAACTGGTTGTTCAGTGACACGCCCAGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCCAAGAGCCCTATGCGTGGCTGCGCCACGCACTAGAGCGCCTGCCGCAGGCGGCCT   >  3:210243/1‑149                                                                                                                                                     GGGAGAAAGAACTGGTTGTTCAGTGACACGCCCTGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCCAAGAGCCCTATGCGTGGCTGCGCCACGCACTAGAGCGCCTGCGGCAGGCGctcta  <  5:269818/149‑6                                                                                                                                                      GGAGAAAGAACTGGTTGTTCAGTGACACGCCCAGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCCAAGAGCCCTATGCGTGGCTGCGCCACGCACTAGAGCGCCTGCCGCAGG         >  4:110784/1‑141                                                                                                                                                      GGAGAAAGAACTGGTTGTTCAGTGACACGCCCAGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCCAAGAGCCCTATGCGTGGCTGCGCCACGCACTAGAGCGCCTGCCGCAGG         <  3:110784/141‑1                                                                                                                                                                                                                                                                                                           GGGCTCTTGGCCGTTGGCTTTGGCCGTCTCGACCAGGCTGTAAAGTTGCGCACTGGCCGTCGCCCCTCTGGGCGTGTCACTGAACAACCAGTTCTTTCTCCCGATGACAAACGGGCGGATCGCACGCTCGGCCGCGTTGTTGTCCATCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3524715‑3524566 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcggGAGAAAGAACTGGTTGTTCAGTGACACGCCCAGAGGGGCGACGGCCAGTGCGCAACTTTACAGCCTGGTCGAGACGGCCAAAGCCAACGGCCAAGAGCCCTATGCGTGGCTGCGCCACGCACTAGAGCGCCTGCCGCAGGCGGCCTC  >  NC_002947/3524616‑3524762

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.