New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4311733 =	77 (1.280)	5 (0.090)	5/256	NT	6.4%	coding (453/1152 nt)	PP_3784	hypothetical protein
	?	NC_002947	4311764 =	71 (1.230)					coding (484/1152 nt)	PP_3784	hypothetical protein

CCCATACCGATCGAGACTTCTCGGAAAGCATCCTGTCGGGCCGCATTGACCCGTTGATAGCGGGTTTCATCGTGAGGACCTTGAGTGATGCCGCCAATGTAGATCCAGGTGCGGAGCAGGTCATCCGGCATGTGCCCCTGGGCATGAGCGGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4311885‑4311733 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggatGACCTGCTCCGCACCTGGA‑TCTACATTGGCGGCATCACTCAAGGTCCTCACGATGAAACCCGCTATCAACGGGTCAATGCGGCCCGACAGGATGCTTTCCGAGAAGTCTCGATCGGTATGGGGGCACTGTGCTCGCCATTTCCGG  >  NC_002947/4311764‑4311908                                                                                                                                                                                                                                                                                                             CCCATACCGATCGAGACTTCTCGGAATGCATGCTTTCGGGCCGCATTGACCCGTTGATTGCGGGTTTCATCGTGATGACCTTGAGTTATGCCGCCAATGTAGATCCAGGTGCGGATCAGGTCATCCGGCATGTGCCCCTGGGCATGAGC                                                                                                                                                        <  6:61303/149‑1                                                                                                                     CAGGTCATCCGGCATGTGCCCCTGGGCATGAGCGGATGACCTGCTCCGCACCTGGAGGATACATTGGCGCCAGCCATAAAGGTCCTCACGATGAAACCCGGTATCAACGGTTCATGGCGGCCCGCCAGGATGCTTTCCGAGAAGTCac                                     >  1:101782/1‑146                                                                                                                      AGGTCATCCGGCATGTGCCCCTGGGCATGAGCGGATGACCTGCTCCGCACCTGGA‑TCTACATTGGCGGCATCACTCAAGGTCCTCACGATGAAACCCGCTATCAACGGGTCAATGCGGCCCGACA                                                          <  5:210109/125‑1                                                                                                                      AGGTCATCCGGCATGTGCCCCTGGGCATGAGCGGATGACCTGCTCCGCACCTGGA‑TCTACATTGGCGGCATCACTCAAGGTCCTCACGATGAAACCCGCTATCAACGGGTCAATGCGGCCCGACA                                                          >  6:210109/1‑125                                                                                                                            TCCGGCATGTGCCCCTGGGCATGAGCGGATGACCTGCTCCGCACCTGGA‑TCTACATTGGCGGCATCACTCAAGGTCCTCACGATGAAACCCGCTATCAACGGGTCAATGCGGCCCGACAGGATGCTTTCCGAGAAGTCTCGATCGGTAT                            >  2:327683/1‑149                                                                                                                                             GGCATGAGCGGATGACCTGCTCCGCACCTGGA‑TCTACATTGGCGGCATCACTCAAGGTCCTCACGATGAAACCCGCTATCAACGGGTCAATGCGGCCCGACAGGATGCTTTCCGAGAAGTCTCGATCGGTATGGGGGCACTGTGCTC             <  1:327683/147‑1                                                                                                                                                      GGATGACCTGCTCCGCACCTGGA‑TCTACATTGGCGGCATCACTCAAGGTCCTCACGATGAAACCCGCTATCAACGGGTCAATGCGGCCCGACAGGATGCTTTCCGAGAAGTCTCGATCGGTATGGGGGCACTGTGCTCGCCATTTCCGG  >  2:207328/1‑149                                                                                                                                                      GGATGACCTGCTCCGAACCTGGA‑TCTACATTGGCGGCATCACTCAAGGTCCTCACGATGAAACCCGCTATCAAAGGGTCAATGCGGCACGACAGGATGCTTTCCGAGAAGTCTAGATCGGTATGGGGGCACTGTGCTCGCCATTTCCGG  >  8:104689/1‑149                                                                                                                                                                                                                                                                                                             CCCATACCGATCGAGACTTCTCGGAAAGCATCCTGTCGGGCCGCATTGACCCGTTGATAGCGGGTTTCATCGTGAGGACCTTGAGTGATGCCGCCAATGTAGATCCAGGTGCGGAGCAGGTCATCCGGCATGTGCCCCTGGGCATGAGCGGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4311885‑4311733 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggatGACCTGCTCCGCACCTGGA‑TCTACATTGGCGGCATCACTCAAGGTCCTCACGATGAAACCCGCTATCAACGGGTCAATGCGGCCCGACAGGATGCTTTCCGAGAAGTCTCGATCGGTATGGGGGCACTGTGCTCGCCATTTCCGG  >  NC_002947/4311764‑4311908

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.