New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4787630 | 74 (1.230) | 4 (0.070) | 4/252 | NT | 5.3% | coding (6210/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
? | NC_002947 | = 4787661 | 72 (1.260) | coding (6179/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
GAGGGCCTGGGCCGCCAGCAGCGAGTGACCACCCAGTTCAAAGAAGTTGTCGTCCAGCCCGACCTGCTCGATGCGCAGGACATCGGCCCAGATCGCTGCGACCTTGCATTCGGTATCGCTGTACGGCGGCACATAGCGCACCTGAAGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4787480‑4787630 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagctggACCGCAAGGCGCTGCCGCAACCCGATCTGGCCCAGCTTCAGGTGCGCTATGTGCCGCCGTACAGCGATACCGAATGCAAGGTCGCAGCGATCTGGGCCGATGTCCTGCGCATCGAGCAGGTCGGGCTGGACGACAACTTCTTTG < NC_002947/4787661‑4787518 GAGGGCCTGGGCCGCCAGCAGCGAGTGACCACCCAGTTCAAAGAAGTTGTCGTCCAGCCCGACCTGCTCGATGCGCAGGACATCGGCCCAGATCGCTGCGACCTTGCATTCGGTATCGCTGTACGGCGGCACATAGCGCACCTGAAGCT > 3:69231/1‑149 CGCCAGCAGCGAGTGACCACCCAGTTCAAAGAAGTTGTCGTCCAGCCCGACCTGCTCGATGCGCAGGACATCGGCCCAGATCGCTGCGACCTTGCATTCGGTATCGCTGTACGGCGGCACATAGCGCACCTGAAGCTGGACCGCAAGGC > 4:299316/1‑149 AAAGAAGTTGTCGTCCAGCCCGACCTGCTCGATGCGCAGGACATCGGCCCAGATCGCTGCGACCTTGCATTCGGTATCGCTGTACGGCGGCACATAGCGCACCTGAAGCTGGACCGCAAGGCGCTGCCGCAACCCGATCTGGCCCAGCT < 3:299316/149‑1 AAAGAAGTTGTCGTCCAGCCCGACCTGCTCGATGCGCAGGACATCGGCCCAGATCGCTGCGACCTTGCATTCGGTATCGCTGTACGGCGGCACATAGCGCACCTGAAGCTGGACCGCAAGGCGCTGCCGCAACCCGATCTGGCCCAGC < 4:117632/148‑1 AGTTGTCGTCCAGCCCGACCTGCTCGATGCGCAGGACATCGGCCCAGATCGCTGCGACCTTGCATTCGGTATCGCTGTACGGCGGCACATAGCGCACCTGAAGCTGGACCGCAAGGCGCTGCCGCAACCCGATCTGGCCCAGCTTCAG < 5:228020/148‑1 AGCTGGACCGCAAGGCGCTGCCGCAACCCGATCTGGCCCAGCTTCAGGTGCGCTATGTGCCGCCGTACAGCGATACCGAATGCAAGGTCGCAGCGATCTGGGCCGATGTCCTGCGCATCGAGCAGGTCGGGCTGGACGACAACTTCTTT < 1:203192/149‑1 AGCTGGACCGCAAGGCGCTGCCGCAACCCGATCTGGCCCAGCTTCAGGTGCGCTATGTGCCGCCGTACAGCGATACCGAATGCAAGGTCGCAGCGATCTGGGCCGATGTCCTGCGCATCGAGCAGGTCGGGCTGGACGACAACTTCTTT < 5:157687/149‑1 GCTGGACCGCAAGGCGCTGCCGCAACCCGATCTGGCCCAGCTTCAGGTGCGCTATGTGCCGCCGTACAGCGATACCGAATGCAAGGTCGCAGCGATCTGGGCCGATGTCCTGCGCATCGAGCAGGTCGGGCTGGACGACAACTTCTTTG < 3:287035/149‑1 GCTGGACCGCAAGGCGCTGCCGCAACCCGATCTGGCCCAGCTTCAGGTGCGCTATGTGCCGCCGTACAGCGATACCGAATGCAAGGTCGCAGCGATCTGGGCCGATGTCCTGCGCATCGAGCAGGTCGGGCTGGACGACAACTTCTTTG < 5:116118/149‑1 GAGGGCCTGGGCCGCCAGCAGCGAGTGACCACCCAGTTCAAAGAAGTTGTCGTCCAGCCCGACCTGCTCGATGCGCAGGACATCGGCCCAGATCGCTGCGACCTTGCATTCGGTATCGCTGTACGGCGGCACATAGCGCACCTGAAGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4787480‑4787630 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagctggACCGCAAGGCGCTGCCGCAACCCGATCTGGCCCAGCTTCAGGTGCGCTATGTGCCGCCGTACAGCGATACCGAATGCAAGGTCGCAGCGATCTGGGCCGATGTCCTGCGCATCGAGCAGGTCGGGCTGGACGACAACTTCTTTG < NC_002947/4787661‑4787518 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |