| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5205175 = | 93 (1.550) | 4 (0.080) | 4/236 | NT | 5.3% | intergenic (+66/+49) | PP_4585/PP_4586 | TrmH family RNA methyltransferase/hypothetical protein |
| ? | NC_002947 | 5205219 = | 61 (1.140) | intergenic (+110/+5) | PP_4585/PP_4586 | TrmH family RNA methyltransferase/hypothetical protein | |||||
GTGCGTGGGCTGATGCGCCTGCCCAGCGTCAGTACCGAGGACTTCGTGCAGATCAGCGAGAACGTGCTGGGGCGGCGTTCGGATGTGCTGCAGAGCAAGGTGTTGCACTAAGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5205334‑5205175‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggcttttcatacGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGGCGCATCAGCCCACGCACTACATCGTCCAACGAACGTTTGGCCTGGGTG > NC_002947/5205219‑5205365 GTGCGTGGGCTGATGCGCCTGCCCAGCGTCAGTACCGAGGACTTCGTGCAGATCAGCGAGAACGTGCTGGGGCGGCGTTCGGATGTGCTGCAGAGCAAGGTGTTGCACTAAGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAA < 8:114366/148‑1GTGCGTGGGCTGATGCGCCTGCCCAGCGTCAGTACCGAGGACTTCGTGCAGATCAGCGAGAACGTGCTGGGGCGGCGTTCGGATGTGCTGCAGAGCAAGGTGTTGCACTAAGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAA < 6:250134/148‑1GTGAGTGGGCTGATGCGCCTGCCCAGCGTCAGTACCGAGGACTTCGTGCAGATCAGCGAGAACGTGCTGGGGCGGCGTTCGGATGTGCTGCAGAGCAAGGTGTTGCACTAAGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAA < 1:35377/148‑1 GTGGGCTGATGCGCCTGCCCAGCGTCAGTACCGAGGACTTCGTGCAGATCAGCGAGAACGTGCTGGGGCGGCGTTCGGATGTGCTGCAGAGCAAGGTGTTGCACTAAGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTT < 2:9926/149‑1 TGGGCTGATGCGCCTGCCCAGCGTCAGTACCGAGGACTTCGTGCAGATCAGCGAGAACGTGCTGGGGCGGCGTTCGGATGTGCTGCAGAGCAAGGTGTTGCACTAAGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTT < 1:190151/149‑1 GGGCTGATGCGCCTGCCCAGCGTCAGTACCGAGGAGTTCGTGCAGATCAGCGAGAACGTGCTGGGGCGGCGTTCGGATGTGCTGCAGAGCAAGGTGTTGCAGTAAGGCCCGTATGAAAAGCCTTGCCTGAGCTTCGTCTCAAGGCTTTT < 8:112362/149‑1 GCTGATGCGCCTGCCCAGCGTCAGTACCGAGGACTTCGTGCAGATCAGCGAGAACGTGCTGGGGCGGCGTTCGGATGTGCTGCAGAGCAAGGTGTTGCACTAAGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCA > 1:58467/1‑149 AAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTG < 3:63281/101‑1 AAAGCCTTGCCTGACATTCGTCTCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGAACGTTCTCGCTG > 4:63281/1‑101 CCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGC > 2:164758/1‑95 CCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGC < 1:164758/95‑1 AAGGCTTTTCATACGGGCCTTAGTGCAACTCCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGAGGCTGGGCAGGCGCATCAGCCCACGCACTACATCGTCCAACGAACGT < 5:294795/149‑1 TTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGGCGCATCAGCCCACGCACTACATCGTCCAACGAACGTTTGGC < 4:151408/147‑1 TTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGGCGCATCAGCCCACGCACTACATCGTCCAACGAACGTTTGGC < 3:125025/147‑1 TTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGGCGCATCAGCCCACGCACTACATCGTCCAACGAACGTTTGGC < 1:290828/147‑1 ATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGGCGCATCAGCCCACGCACTACATCGTCCAACGAACGTTTGGCCTGGG > 6:385232/1‑149 TACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGGCGCATCAGCCCACGCACTACATCGTCCAACGAACGTTTGGCCTGGGT < 7:114366/149‑1 ACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGGCGCATCAGCCCACGCACTACATCGTCCAACGCACGTTTGGCCTGGGTG > 8:14584/1‑149 GTGCGTGGGCTGATGCGCCTGCCCAGCGTCAGTACCGAGGACTTCGTGCAGATCAGCGAGAACGTGCTGGGGCGGCGTTCGGATGTGCTGCAGAGCAAGGTGTTGCACTAAGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5205334‑5205175‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggcttttcatacGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGGCGCATCAGCCCACGCACTACATCGTCCAACGAACGTTTGGCCTGGGTG > NC_002947/5205219‑5205365 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |