BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5205175 =	93 (1.550)	4 (0.080)	4/236	NT	5.3%	intergenic (+66/+49)	PP_4585/PP_4586	TrmH family RNA methyltransferase/hypothetical protein
*	?	NC_002947	5205219 =	61 (1.140)	4 (0.080)	4/236	NT	5.3%	intergenic (+110/+5)	PP_4585/PP_4586	TrmH family RNA methyltransferase/hypothetical protein

Only 100 of 109 total aligned reads displayed.

CCTGGCGGCGACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGGC  >  NC_002947/5205028‑5205318

ccTGGCGGCGACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGt                                                                                                                                                <  5:368016/149‑1 (MQ=255)

cacccaggccaaacgtgcgttggacgatgtagtgcgtgggctgatgcgcctgcccagcgtcagtaccgaggacttcgtgcagatcagcgagaacgtgctggggcggcgttcggatgtgctgcagagcaaggtgttgcactaaggcccGt                                                                                                                                                >  8:14584‑M1/148‑149 (MQ=255)

 acccaggccaaacgttcgttggacgatgtagtgcgtgggctgatgcgcctgcccagcgtcagtaccgaggacttcgtgcagatcagcgagaacgtgctggggcggcgttcggatgtgctgcagagcaaggtgttgcactaaggcccGTa                                                                                                                                               <  7:114366‑M1/3‑1 (MQ=255)

  cccaggccaaacgttcgttggacgatgtagtgcgtgggctgatgcgcctgcccagcgtcagtaccgaggacttcgtgcagatcagcgagaacgtgctggggcggcgttcggatgtgctgcagagcaaggtgttgcactaaggcccGTAt                                                                                                                                              >  6:385232‑M1/146‑149 (MQ=255)

       gcgACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATg                                                                                                                                             <  8:97418/145‑1 (MQ=255)

       gcgACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATg                                                                                                                                             >  7:97418/1‑145 (MQ=255)

       gcgACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGaaaa                                                                                                                                         <  7:42728/149‑1 (MQ=255)

       gccaaacgttcgttggacgatgtagtgcgtgggctgatgcgcctgcccagcgtcagtaccgaggacttcgtgcagatcagcgagaacgtgctggggcggcgttcggatgtgctgcagagcaaggtgttgcactaaggcccGTATGaa                                                                                                                                           <  3:125025‑M1/7‑1 (MQ=255)

       gccaaacgttcgttggacgatgtagtgcgtgggctgatgcgcctgcccagcgtcagtaccgaggacttcgtgcagatcagcgagaacgtgctggggcggcgttcggatgtgctgcagagcaaggtgttgcactaaggcccGTATGaa                                                                                                                                           <  4:151408‑M1/7‑1 (MQ=255)

       gccaaacgttcgttggacgatgtagtgcgtgggctgatgcgcctgcccagcgtcagtaccgaggacttcgtgcagatcagcgagaacgtgctggggcggcgttcggatgtgctgcagagcaaggtgttgcactaaggcccGTATGaa                                                                                                                                           <  1:290828‑M1/7‑1 (MQ=255)

         gACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGc                                                                                                                                       <  5:116261/149‑1 (MQ=255)

         gACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGCCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATTAAAAGc                                                                                                                                       >  8:41797/1‑149 (MQ=255)

           cGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCt                                                                                                                                     <  2:252963/149‑1 (MQ=255)

            ggTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCtt                                                                                                                                    <  8:263841/149‑1 (MQ=255)

            acgttcgttggacgatgtagtgcgtgggctgatgcgcctgcccagcctcagtaccgaggacttcgtgcagatcagcgagaacgtgctggggcggcgttcggatgtgctgcagagcaaggagttgcactaaggcccGTATGAAAAGCCtt                                                                                                                                    <  5:294795‑M1/14‑1 (MQ=255)

              tGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCtt                                                                                                                                    >  4:179737/1‑147 (MQ=255)

              tGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTga                                                                                                                                  <  2:335926/149‑1 (MQ=255)

                    tggtgTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGaa                                                                                                                            <  4:203260/149‑1 (MQ=255)

                     ggtgTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAg                                                                                                                           >  7:163262/1‑149 (MQ=255)

                      gtgtTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAgg                                                                                                                          >  7:61899/1‑149 (MQ=255)

                      gtgtTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAg                                                                                                                           <  1:2808/148‑1 (MQ=255)

                           gtttGACAGCATGGCCAAAGGGCTGAATACACGCTCAGGGCCCAAGTTAAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGCTGCCTTTGGCCTGTATGAAAACCCTTGAGACGAAGGTCAg                                                                                                                      <  1:9479/145‑1 (MQ=255)

                           gtATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAg                                                                                                                      <  6:121900/148‑1 (MQ=255)

                            tATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAgg                                                                                                                     >  5:109373/1‑148 (MQ=255)

                              tGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGc                                                                                                                    >  8:211779/1‑147 (MQ=255)

                              tGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGc                                                                                                                    >  8:252181/1‑147 (MQ=255)

                              tGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGc                                                                                                                    >  8:74503/1‑147 (MQ=255)

                                aCCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCTGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAgg                                                                                                                <  3:287595/149‑1 (MQ=255)

                                 ccGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCTCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAgg                                                                                                                <  1:98214/148‑1 (MQ=255)

                                 ccGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGc                                                                                                               >  2:136933/1‑149 (MQ=255)

                                    cATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCttt                                                                                                            <  2:358693/149‑1 (MQ=255)

                                     aTGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCtttt                                                                                                           <  6:100341/149‑1 (MQ=255)

                                      tGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTc                                                                                                          <  8:96790/149‑1 (MQ=255)

                                         ccAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATa                                                                                                       >  7:188128/1‑149 (MQ=255)

                                         ccAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAAAAAGGCCGTGCGGCGAAGCATGGGCTGTCAAAGGCCGTGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTAGAGACGAAGGTCAGGCAAGGCTATTCATa                                                                                                       >  2:78652/1‑149 (MQ=255)

                                          cAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATAc                                                                                                      >  2:312453/1‑149 (MQ=255)

                                           aaaGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCTAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCGGGCAAGGCTTTTCATACg                                                                                                     >  5:201858/1‑149 (MQ=255)

                                              gggCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGc                                                                                                  <  3:179737/149‑1 (MQ=255)

                                               ggCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCGTTTCATACGGGcc                                                                                                 >  6:294795/1‑149 (MQ=255)

                                                    aaTACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTa                                                                                              <  1:136933/147‑1 (MQ=255)

                                                    aaTACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAg                                                                                             <  6:301812/148‑1 (MQ=255)

                                                    aaTACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGt                                                                                            >  4:296514/1‑149 (MQ=255)

                                                      tACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGc                                                                                          <  7:41056/149‑1 (MQ=255)

                                                         ccGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCtttt                                                                                                           >  2:74351/1‑129 (MQ=255)

                                                         ccGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCtttt                                                                                                           <  1:74351/129‑1 (MQ=255)

                                                         ccGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCaa                                                                                        >  7:101441/1‑148 (MQ=255)

                                                              cAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCtt                                                                                  >  1:368832/1‑149 (MQ=255)

                                                                    ccAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTg                                                                            <  7:320268/149‑1 (MQ=255)

                                                                    ccAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTg                                                                            >  3:151408/1‑149 (MQ=255)

                                                                     cAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAATGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTg                                                                            >  3:45479/1‑148 (MQ=255)

                                                                      aaGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAATGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTgca                                                                          <  4:45479/149‑1 (MQ=255)

                                                                      aaGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCTAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCGGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTgca                                                                          <  6:201858/149‑1 (MQ=255)

                                                                      aaGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTgca                                                                          <  3:296514/149‑1 (MQ=255)

                                                                         ttCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTgcagca                                                                       >  2:361831/1‑149 (MQ=255)

                                                                              aTAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTga                                                                                                                                  >  4:68681/1‑85 (MQ=255)

                                                                              aTAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTga                                                                                                                                  <  3:68681/85‑1 (MQ=255)

                                                                              aTAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACTAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATcc                                                                  >  2:290828/1‑149 (MQ=255)

                                                                              aTAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATcc                                                                  >  7:138209/1‑149 (MQ=255)

                                                                                aaCAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCg                                                                 >  4:348685/1‑148 (MQ=255)

                                                                                  cAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAAc                                                              <  7:211779/149‑1 (MQ=255)

                                                                                  cAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAAc                                                              >  3:245159/1‑149 (MQ=255)

                                                                                   aaGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAAcg                                                             <  4:216764/149‑1 (MQ=255)

                                                                                    cagcgagaacgttctggggcggcgttcggatgtgctgcagagcaaggtgttgcactaaggcccGTATGAAAAGCCTTGAGACGAATGTCAGGCAAGGCttt                                                                                                            >  4:63281‑M1/64‑101 (MQ=255)

                                                                                    cagcgagaacgtgctggggcggcgttcggatgtgctgcagagcaaggtgttgcactaaggcccGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCttt                                                                                                            <  3:63281‑M1/38‑1 (MQ=255)

                                                                                     ggCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAAcgcc                                                           <  6:181918/149‑1 (MQ=255)

                                                                                      gcgagaacgtgctggggcggcgttcggatgtgctgcagagcaaggtgttgcactaaggcccGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAgg                                                                                                                <  1:164758‑M1/34‑1 (MQ=255)

                                                                                      gcgagaacgtgctggggcggcgttcggatgtgctgcagagcaaggtgttgcactaaggcccGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAgg                                                                                                                >  2:164758‑M1/62‑95 (MQ=255)

                                                                                      gCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAAcgccg                                                          >  1:225276/1‑149 (MQ=255)

                                                                                        cGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACgccgcc                                                        >  4:197692/1‑149 (MQ=255)

                                                                                            cggcgAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCa                                                     <  6:303060/148‑1 (MQ=255)

                                                                                            cggcgAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAg                                                    <  2:368832/149‑1 (MQ=255)

                                                                                             ggcgAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGc                                                   <  6:109373/149‑1 (MQ=255)

                                                                                              gcgAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCa                                                  >  7:12901/1‑149 (MQ=255)

                                                                                               cgAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCAc                                                 <  7:74503/149‑1 (MQ=255)

                                                                                               cgAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCAc                                                 >  3:330549/1‑149 (MQ=255)

                                                                                               cgAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCAc                                                 <  3:348685/149‑1 (MQ=255)

                                                                                                gAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACg                                                <  5:382905/149‑1 (MQ=255)

                                                                                                       gggCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCg                                          <  7:345788/148‑1 (MQ=255)

                                                                                                        ggCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGc                                         <  8:12901/148‑1 (MQ=255)

                                                                                                          cTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCa                                                  >  1:208978/1‑137 (MQ=255)

                                                                                                          cTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCa                                                  <  2:208978/137‑1 (MQ=255)

                                                                                                               aaaGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGc                                 <  7:308694/149‑1 (MQ=255)

                                                                                                               aaaGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGc                                 <  8:188128/149‑1 (MQ=255)

                                                                                                                     cGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCg                                          <  5:93647/134‑1 (MQ=255)

                                                                                                                     cGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCg                                          >  6:93647/1‑134 (MQ=255)

                                                                                                                           aGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCg                     <  2:225276/149‑1 (MQ=255)

                                                                                                                           aGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCg                     <  5:166499/149‑1 (MQ=255)

                                                                                                                           aGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCg                     <  4:330549/149‑1 (MQ=255)

                                                                                                                           aGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCg                     >  2:349167/1‑149 (MQ=255)

                                                                                                                            ggCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTGTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCgg                    <  7:41797/149‑1 (MQ=255)

                                                                                                                             gcgcCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCgg                    >  3:243729/1‑148 (MQ=255)

                                                                                                                              cgcCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTa                  <  1:349167/149‑1 (MQ=255)

                                                                                                                                 cAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACt                >  7:22115/1‑148 (MQ=255)

                                                                                                                                     gATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGc           >  4:125025/1‑149 (MQ=255)

                                                                                                                                       tGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTg         >  3:321321/1‑149 (MQ=255)

                                                                                                                                         ccTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTgg        <  8:22115/148‑1 (MQ=255)

                                                                                                                                         ccTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTgg        <  7:252181/148‑1 (MQ=255)

                                                                                                                                          cTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTggg       >  8:170081/1‑148 (MQ=255)

                                                                                                                                              ggCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGgc  <  7:97790/149‑1 (MQ=255)

                                                                                                                                              ggCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGgc  <  5:27847/149‑1 (MQ=255)

CCTGGCGGCGACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGAGACGAAGGTCAGGCAAGGCTTTTCATACGGGCCTTAGTGCAACACCTTGCTCTGCAGCACATCCGAACGCCGCCCCAGCACGTTCTCGCTGATCTGCACGAAGTCCTCGGTACTGACGCTGGGCAGGC  >  NC_002947/5205028‑5205318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.