New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5459448 =	70 (1.160)	7 (0.120)	5/254	NT	9.7%	coding (512/606 nt)	PP_4795	lipoprotein
	?	NC_002947	5459476 =	63 (1.100)					coding (540/606 nt)	PP_4795	lipoprotein

CGGGGGCGAGTTTCATGGGGAACAGGCGGGGCGCCCGAGGGCGCCCCTCGCGGGCTTAGTTGCCCGGTACTTCCAGTGGCGATTGCTGAGGCGTCTCGGCTTGCTGGCGGCGGGCAGCCTCCAGCGCGGCAGCTTCGGCTTGGGCGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5459597‑5459448 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgctGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGAGGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCC  >  NC_002947/5459476‑5459595                                                                                                                                                                                                                                                                                CGGGGGCGCGTTTCATGGCGAACCGGCGGGGCGCCCGAGGGCGCCCCTCGCGGGCTTAGTTGCCCGGTACTTCCAGTGGCGATTGCTGAGGCGTCTCGGCTTGCTGGCGGCGGGCAGCCTCCAGCGCGGCAGCTTCGGCTTGGGCGCGC                                                                                                                           <  6:370573/149‑1                                                                                                                        TCCAGCGCGGCAGCTTCGGCTTGGGCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTACGCCCGCGAGGGGCGCCCGCGGGCGGCCCGCCGGGTCGCCCTGGAACGCGCC    >  5:247709/1‑149                                                                                                                        TCCAGCGCGGCAGCTTCGGCTTGGGCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGAGGGGCGCCCTCGGGCGCCCCGCCTGTTACCCATGAAACTCCCC    >  2:282757/1‑149                                                                                                                        TCCAGCGCGGCAGCTTCGGCTTGGGCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGAGGGGCGCCCTCGGGC                                <  5:202492/121‑1                                                                                                                        TCCAGCGCGGCAGCTTCGGCTTGGGCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGAGGGGCGCCCTCGGGC                                >  6:202492/1‑121                                                                                                                          CAGCGCGGCAGCTTCGGCTTGGGCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGAGGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCC  >  6:71544/1‑149                                                                                                                           AGCGCGGCAGCTTCGGCTTGGGCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAAT                                                                                 <  7:353933/69‑1                                                                                                                           AGCGCGGCAGCTTCGGCTTGGGCGCGCTGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAAT                                                                                 >  8:353933/1‑69                                                                                                                                                                                                                                                                                CGGGGGCGAGTTTCATGGGGAACAGGCGGGGCGCCCGAGGGCGCCCCTCGCGGGCTTAGTTGCCCGGTACTTCCAGTGGCGATTGCTGAGGCGTCTCGGCTTGCTGGCGGCGGGCAGCCTCCAGCGCGGCAGCTTCGGCTTGGGCGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5459597‑5459448 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgctGGAGGCTGCCCGCCGCCAGCAAGCCGAGACGCCTCAGCAATCGCCACTGGAAGTACCGGGCAACTAAGCCCGCGAGGGGCGCCCTCGGGCGCCCCGCCTGTTCCCCATGAAACTCGCCCC  >  NC_002947/5459476‑5459595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.