New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5499260 =	64 (1.060)	3 (0.050)	3/248	NT	5.5%	coding (38/720 nt)	cobK	precorrin‑6x reductase
	?	NC_002947	5499339 =	43 (0.770)					coding (117/720 nt)	cobK	precorrin‑6x reductase

AGGGTGATGCCCGCTTCGCGCAGGTAACGGGTCAGGCCCTCGACACCGCCATAGCCCCCGACCCGCACCTGGCATTGCAAGCCCTGGGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5499416‑5499260 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagggcttGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACG  >  NC_002947/5499339‑5499479                                                                                                                                                                                                                                                                                                            AGGGTGATGCCCGCTTCGCGCAGGTAACGGGTCAGGCCCTCGACACCGCCATAGCCCCCGACCCGCACCTGGCATTGCAAGCCCTGGGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGC                                                                                                                                                       >  4:141730/1‑149   GGTGATGCCCGCTTCGCGCAGGTAACGGGTCAGGCCCTCGACACCGCCATAGCCCCCGACCCGCACCTGGCATTGCAAGCCCTGGGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCA                                                                                                                                                     <  6:254833/149‑1   GGTGATGCCCGCTTCGCGCAGGTAACGGGTCAGGCCCTCGACACCGCCATAGCCCCCGACCCGCACCTGGCATTGCAAGCCCTGGGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGC                                                                                                                                                       >  2:240777/1‑147      GATGCCCGCTTCGCGCAGGTAACGGGTCAGGCCCTCGACACCGCCATAGCCCCCGACCCGCACCTGGCATTGCAAGCCCTGGGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGG                                                                                                                                                  >  2:296407/1‑149       ATGCCCGCTTCGCGCAGGTAACGGGTCAGGCCCTCGACACCGCCATAGCCCCCGACCCGCACCTGGCATTGCAAGCCCTGGGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGG                                                                                                                                                  <  1:240777/148‑1           CCGCTTCGCGCAGGTAACGGGTCAGGCCCTCGACACCGCCATAGCCCCCGACCCGCCCCTGGCATTGCAAGCCCTGGGGCACGCGGCCGATACCGGCCCGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGGCTT                                                                                                                                               >  5:85244/1‑147           CCGCTTCGCGCAGGTAACGGGTCAGGCCCTCGACACCGCCATACCCCCCGACCCGCACCTGGCATTGCAAGCCCTGGGGCACGCGGCCAATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTGGGCGGGCCATCGCCAGGGCTT                                                                                                                                               >  3:15116/1‑147                                                                           TTGCAAGCCCTGGGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGC                                                                             >  3:594/1‑149                                                                              CAAGCCCTGGGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGG                                                                          >  7:304971/1‑149                                                                                            CGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGA                                                            <  8:304971/149‑1                                                                                                                                                     CCAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCAC   <  5:56121/149‑1                                                                                                                                                      CAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACG  >  3:226340/1‑149                                                                                                                                                      CAGGGCTTGCAATGCCAGGTGCGGGTCGGGGGCTATGGAGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACG  >  3:43897/1‑149                                                                                                                                                                                                                                                                                                            AGGGTGATGCCCGCTTCGCGCAGGTAACGGGTCAGGCCCTCGACACCGCCATAGCCCCCGACCCGCACCTGGCATTGCAAGCCCTGGGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5499416‑5499260 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagggcttGCAATGCCAGGTGCGGGTCGGGGGCTATGGCGGTGTCGAGGGCCTGACCCGTTACCTGCGCGAAGCGGGCATCACCCTGCTGATCGACGCCACCCACCCCTATGCCGCGCAAATCAGCCGCAATGCCGCCAGCGCCGCACG  >  NC_002947/5499339‑5499479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.