New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5919152	61 (1.010)	4 (0.070)	4/266	NT	6.4%	coding (151/306 nt)	PP_5189	hypothetical protein
	?	NC_002947	= 5919176	56 (0.930)					coding (175/306 nt)	PP_5189	hypothetical protein

GGCCGCCAACAACGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5919031‑5919152 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCAGCCAGTCATCCTG‑CTGGCTGACCTGCACGCTATGCGGGGTCAGGAACTGCAAGGCGAACAGGTTGAGCACCCGGCACAGGCTATCGGGCTCGGCCTCGGCCTGCAGGCGATAGTG  <  NC_002947/5919176‑5919059                                                                                                                                                                                                                                                   GGCCGCCAACAACGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAGTCATCCTG‑CTGGCTGAC                                                                                               <  2:312080/147‑1                                                                                            TTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCC‑GGCAGGATGACTGGCTGGCCTGCACGCTATGCGGGGTCAGGAACTGCAAGGCGAACAGGTTGAGCACCCGGCACAGGCTATCGGGCTCGGCCTCGGCCTGCAGGCGATAGTG  >  3:248374/1‑149                                                                                                AGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGCCTGCACGCTATGCGGGGTCAGGAACTGCAAGGCGAACAGGTTGAGCACCCGGCACAGGCTATCGGGCTCG                         <  3:253364/122‑1                                                                                                AGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGCCTGCACGCTATGCGGGGTCAGGAACTGCAAGGCGAACAGGTTGAGCACCCGGCACAGGCTATCGGGCTCG                         >  4:253364/1‑122                                                                                                                                                                                                                                                   GGCCGCCAACAACGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5919031‑5919152 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCAGCCAGTCATCCTG‑CTGGCTGACCTGCACGCTATGCGGGGTCAGGAACTGCAAGGCGAACAGGTTGAGCACCCGGCACAGGCTATCGGGCTCGGCCTCGGCCTGCAGGCGATAGTG  <  NC_002947/5919176‑5919059

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.