New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5919152	61 (1.010)	4 (0.070)	4/266	NT	6.4%	coding (151/306 nt)	PP_5189	hypothetical protein
	?	NC_002947	= 5919176	56 (0.930)					coding (175/306 nt)	PP_5189	hypothetical protein

CGCACAGCCCCGTACCGACGCCTGGGCCGCCAACAACGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGGGTGAGGTGAGCCTGACCAACTTGCAGCGAGTGGCGTTGGCA  >  NC_002947/5919007‑5919298                                                                                                                                                  |                                                                                                                                                    cGCACAGCCCCGTACCGACGCCTGGGCCGCCAACAACGCCCACAGCACCGTTCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGTGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTca                                                                                                                                                  <  7:332485/149‑1 (MQ=255) cGCACAGCCCCGTACCGACGCCTGGGCCGCCAACAACGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTca                                                                                                                                                  <  7:53270/149‑1 (MQ=255)   cacaGCCCCGTACCGACGCCTGGGCCGCCAACAACGCCCACACCACCGTGCACAATCGCCTGCAGGCCGAGGCCGAGCCCGAAAGCCTGTGCCGGGTGCTCAACCTGTACGCCTTGCAGTACCTCACCCCGCATAGCGTGCAGGTcagc                                                                                                                                                <  1:243325/149‑1 (MQ=255)        ccccGTACCGACGCCTGGGCCGCCAACAACGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTcagccag                                                                                                                                             >  7:136410/1‑147 (MQ=255)         cccGTACCGACGCCTGGGCCGCCAACAACGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCcag‑cag                                                                                                                                         >  6:169740/1‑149 (MQ=255)          ccGTACCGACGCCTGGGCCGCCAACAACGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCcag‑cag                                                                                                                                         >  8:35148/1‑148 (MQ=255)          ccGTACCGACGCCTGGGCCGCCAACAACGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAgg                                                                                                                                        <  6:360573/149‑1 (MQ=255)              aCCGACGCCTGGGCCGCCAACAACGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGa                                                                                                                                    >  5:307208/1‑149 (MQ=255)                cGACGCCTGGGCCGCCAACAACGCCCACTGCACCGTGCACTATCGCCTGCAGGCCGACGCCGCGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATATGGTGCATGTAACCCAG‑CACGATGAcg                                                                                                                                  >  1:213288/1‑148 (MQ=255)                       tGGGCCGCCAACAACGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGa                                                                                                                           >  6:79155/1‑149 (MQ=255)                         ggCCGCCAACAACGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGtcagccagtcatcctgctggctgac                                                                                                                            <  2:312080‑M1/147‑26 (MQ=255)                         ggCCGCCAACAACGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGata                                                                                                                         <  3:251349/149‑1 (MQ=255)                         ggCCGCCAACAACGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGata                                                                                                                         >  7:218165/1‑149 (MQ=255)                            cgccAACAACGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCg                                                                                                                      <  5:79155/149‑1 (MQ=255)                                  caacGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCg                                                                                                                <  5:295624/149‑1 (MQ=255)                                      gCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGAGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCAt                                                                                                            >  1:259299/1‑149 (MQ=255)                                       cccACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCAtt                                                                                                           <  8:136410/149‑1 (MQ=255)                                         cacaGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTgg                                                                                                         >  2:54421/1‑149 (MQ=255)                                          acaGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCATCCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGc                                                                                                        <  7:304820/149‑1 (MQ=255)                                            aGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCgg                                                                                                      <  7:35148/149‑1 (MQ=255)                                               aCCGTGCACTCTCGCCTGCACGCCGAGGCCGAGCCCGATAGCCTGCGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGATCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGtt                                                                                                   <  4:281554/149‑1 (MQ=255)                                                ccGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGtt                                                                                                   >  2:162808/1‑148 (MQ=255)                                                 cGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCTCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGtt                                                                                                   >  8:299675/1‑147 (MQ=255)                                                   tGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGCCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGc                                                                                                              >  2:61068/1‑134 (MQ=255)                                                   tGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGCCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGc                                                                                                              <  1:61068/134‑1 (MQ=255)                                                     cACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGCCAGCCAGTCATCCTGCC‑GGCTGAcctgcacgctatgcggggtcaggaactgcaa                                                                                             >  3:248374‑M2/1‑118 (MQ=255)                                                          tCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCAc                                                                                         <  1:160230/148‑1 (MQ=255)                                                                     ccgaggccgagCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGt                                                                              >  1:375012/1‑148 (MQ=255)                                                                      cgagttcgagCCCGATAGCCTGTGCCGGGTGCTCATCCTGTTCGCCTTGCAGTTCGTGACCGCGCATAGAGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTTAGCTGGCACCGGGCCGAGGTCa                                                                            <  2:213288/143‑1 (MQ=255)                                                                        aggccgagCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCAtt                                                                          <  8:218165/149‑1 (MQ=255)                                                                           ccgagCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGca                                                                       <  8:7384/149‑1 (MQ=255)                                                                            cgagCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGCCAGCCAGTCATCCTG‑CTGGCTGAcctgcacgctatgcggggtcaggaact                                                                                                 <  3:253364‑M2/122‑28 (MQ=255)                                                                            cgagCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGCCAGCCAGTCATCCTG‑CTGGCTGAcctgcacgctatgcggggtcaggaact                                                                                                 >  4:253364‑M2/1‑95 (MQ=255)                                                                             gagCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTTCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCAt                                                                           <  8:88886/143‑1 (MQ=255)                                                                             gagCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCAt                                                                           >  7:88886/1‑143 (MQ=255)                                                                             gagCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGcaca                                                                     <  1:162808/149‑1 (MQ=255)                                                                                  cGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGc                                                                                    <  8:173170/129‑1 (MQ=255)                                                                                  cGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGc                                                                                    >  7:173170/1‑129 (MQ=255)                                                                                   gATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGatat                                                                                                                        >  1:108056/1‑92 (MQ=255)                                                                                   gATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGatat                                                                                                                        <  2:108056/92‑1 (MQ=255)                                                                                     tAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGc                                                             <  5:169740/149‑1 (MQ=255)                                                                                               cGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTGATTGCACAGAAACTGCGTAACCTGgt                                                   <  2:259299/149‑1 (MQ=255)                                                                                               cGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGca                                                                       >  4:169309/1‑129 (MQ=255)                                                                                               cGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGca                                                                       <  3:169309/129‑1 (MQ=255)                                                                                                      tCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGtgtgtgtg                                            >  4:266355/1‑149 (MQ=255)                                                                                                      tCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGtgtgtgtg                                            >  4:264550/1‑149 (MQ=255)                                                                                                       cAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTgg                                           >  7:92318/1‑149 (MQ=255)                                                                                                        aaCCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTggg                                          >  4:267722/1‑149 (MQ=255)                                                                                                         aCCTGTTCGCCTTGCAGTTCCTGACCCCTCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGggt                                         <  7:299675/149‑1 (MQ=255)                                                                                                           cTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGggtga                                       <  2:375012/149‑1 (MQ=255)                                                                                                              ttCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGggtgaggt                                    <  1:54421/149‑1 (MQ=255)                                                                                                                 gCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGggtgaggtga                                  <  3:267722/148‑1 (MQ=255)                                                                                                                  ccTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGGGTGAGGTGAGc                                >  4:163256/1‑149 (MQ=255)                                                                                                                   cTTGAAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGAATGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGACGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGGGTGAGGTGAGcc                               >  7:186507/1‑149 (MQ=255)                                                                                                                    ttGCAGTTCCTGACCCCGCATAGCGTGCAGGtcagccggcaggatgactggctggcctgcacgctatgcggggtcaggaactgcaaggcgaacaggttgagcacccggcacaggctatcgggctcggcctcggcctgcaggcgatagtg                               >  3:248374‑M1/1‑31 (MQ=255)                                                                                                                    ttGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGGGTGAGGTGAGCCt                              >  1:135787/1‑149 (MQ=255)                                                                                                                       cAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGGGTGAGGTGAGCCTGa                            <  2:135787/148‑1 (MQ=255)                                                                                                                        aGTTCCTGACCCCGCATAGCGTGCAGGtcagccagcaggatgactggctggcctgcacgctatgcggggtcaggaactgcaaggcgaacaggttgagcacccggcacaggctatcgggctcg                                                      <  3:253364‑M1/122‑96 (MQ=255)                                                                                                                        aGTTCCTGACCCCGCATAGCGTGCAGGtcagccagcaggatgactggctggcctgcacgctatgcggggtcaggaactgcaaggcgaacaggttgagcacccggcacaggctatcgggctcg                                                      >  4:253364‑M1/1‑27 (MQ=255)                                                                                                                            ccTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGGGTGAGGTGAGCCTGACCAACt                      >  1:277984/1‑149 (MQ=255)                                                                                                                              tGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGGGTGAGGTGAGCCTGACCAACTTg                    >  6:277445/1‑149 (MQ=255)                                                                                                                                  cccGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTg                                                     >  3:224333/1‑112 (MQ=255)                                                                                                                                  cccGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTg                                                     <  4:224333/112‑1 (MQ=255)                                                                                                                                  cccGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGGGTGAGGTGAGCCTGACCAACTTGCAGc                >  2:136992/1‑149 (MQ=255)                                                                                                                                  cccGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGGGTGAGGTGAGCCTGACCAACTTGCAGc                <  1:12296/149‑1 (MQ=255)                                                                                                                                   ccGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGGGTGAGGTGAGCCTGACCAACTTGCAGc                >  7:186330/1‑148 (MQ=255)                                                                                                                                    cGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGgt                                                   <  2:320919/112‑1 (MQ=255)                                                                                                                                    cGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGgt                                                   >  1:320919/1‑112 (MQ=255)                                                                                                                                    cGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGGGTGAGGTGAGCCTGACCAACTTGCAGc                >  1:158540/1‑147 (MQ=255)                                                                                                                                      cATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGGGTGAGGTGAGCCTGACCAACTTGCAGCGAGt            <  6:307208/149‑1 (MQ=255)                                                                                                                                           cGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGGGTGAGGTGAGCCTGACCAACTTGCAGCGAGTGGCGt       >  3:352592/1‑149 (MQ=255)                                                                                                                                                  gTCAGCCAG‑CAGGATGACTGGCTGAcctgcacgctatgcggggtcaggaactgcaaggcgaacaggttgagcacccggcacaggctatcgggctcggcctcggcctgcaggcgatagtgcacggtgctgtgggcgttgttggcggcc  <  2:312080‑M2/147‑123 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CGCACAGCCCCGTACCGACGCCTGGGCCGCCAACAACGCCCACAGCACCGTGCACTATCGCCTGCAGGCCGAGGCCGAGCCCGATAGCCTGTGCCGGGTGCTCAACCTGTTCGCCTTGCAGTTCCTGACCCCGCATAGCGTGCAGGTCAGCCAG‑CAGGATGACTGGCTGGATATCGAAATCGGCATTGGCGGGTTGAGCTGGCACCGGGCCGAGGTCATTGCACAGAAACTGCGTAACCTGGTGTGTGTGGGTGAGGTGAGCCTGACCAACTTGCAGCGAGTGGCGTTGGCA  >  NC_002947/5919007‑5919298

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.