New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 111497	55 (0.910)	3 (0.050)	3/256	NT	5.7%	coding (1517/1590 nt)	ctaD	cytochrome c oxidase subunit 1
	?	NC_002947	= 111528	46 (0.790)					coding (1548/1590 nt)	ctaD	cytochrome c oxidase subunit 1

ACTACAACCTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCTGTTGATGCTGACGGTGGTGATGTTCGC  >  NC_002947/111353‑111644                                                                                                                                                  |                                                                                                                                                    aCTACAACCTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAg                                                                                                                                                 <  4:150098/149‑1 (MQ=255)     cAACCTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAggg                                                                                                                                               <  2:267857/147‑1 (MQ=255)     cAACCTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGcc                                                                                                                                             >  1:263287/1‑149 (MQ=255)     cAACCTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGcc                                                                                                                                             >  5:84006/1‑149 (MQ=255)       aCCTGCAGGTCGCCGCTTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCtt                                                                                                                                           <  8:63681/149‑1 (MQ=255)        ccTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCtt                                                                                                                                           >  6:232865/1‑148 (MQ=255)            cAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGt                                                                                                                                       <  4:192580/148‑1 (MQ=255)              gTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGt                                                                                                                                    <  6:256328/149‑1 (MQ=255)                     gATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATAcc                                                                                                                             <  7:334015/149‑1 (MQ=255)                           aaCATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCaggcgagggtatcgaccactcaaggccctc                                                                                                                       >  6:229715‑M1/1‑119 (MQ=255)                           aaCATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGcc                                                                                                                       >  7:107216/1‑149 (MQ=255)                           aaCATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGc                                                                                                                        <  8:352685/148‑1 (MQ=255)                           aaCATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGc                                                                                                                        <  7:485/148‑1 (MQ=255)                                 gtgtCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTgcgcc                                                                                                                 <  4:318705‑M2/149‑6 (MQ=255)                                   gtcgtcGCTCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGGCGATACCCTCGCCTGCGCCCt                                                                                                               <  2:301682/149‑1 (MQ=255)                                    tcgtcgATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCaggcgagggtatcgaccactcaaggccctcggcgccatc                                                                                                              <  5:229715‑M1/149‑40 (MQ=255)                                      gtcgATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTAc                                                                                                             >  7:154340/1‑148 (MQ=255)                                      gtcgATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTAc                                                                                                             >  5:40935/1‑148 (MQ=255)                                       tcgATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGTCGACGAGTGCCTTGAGTGGTCGATACACTCGCCTGCGCCCTAcc                                                                                                            >  7:121698/1‑148 (MQ=255)                                       tcgATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCaggcgagggtatcgaccactcaaggccctcggcgccatccca                                                                                                           <  6:78326‑M1/149‑43 (MQ=255)                                       tcgATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATAc                                                                                                                              >  3:160750/1‑130 (MQ=255)                                       tcgATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATAc                                                                                                                              <  4:160750/130‑1 (MQ=255)                                       tcgATCGGCACGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCt                                                                                                                                            <  2:155132/116‑1 (MQ=255)                                         gATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGAGGTCGAAACCCTCGCCAGCGCCCTACcaca                                                                                                         >  2:57175/1‑149 (MQ=255)                                              gcgcGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTc                                                                                                    >  5:371347/1‑149 (MQ=255)                                                  gTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGa                                                                                                >  1:126791/1‑149 (MQ=255)                                                  gTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGa                                                                                                <  5:232865/149‑1 (MQ=255)                                                     cATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTcc                                                                                                   <  4:10283/143‑1 (MQ=255)                                                     cATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTcc                                                                                                   >  3:10283/1‑143 (MQ=255)                                                         ttCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCAGCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACAccccc                                                                                         <  2:129873/149‑1 (MQ=255)                                                          tCGGCGCCACGCAGATCTTGTTCCTGTTCATTGTCATCAA‑GTGCATCCGGGGTTGCGCGTCGGCACCGGCCAAACCCTGGGATGGCTCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCAGTCCTTCCAGACAccgccg                                                                                        <  8:104610/149‑1 (MQ=255)                                                             gcgcCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGaa                                                                                     <  2:263287/149‑1 (MQ=255)                                                              cgcCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAg                                                                                    <  7:213543/149‑1 (MQ=255)                                                                ccACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTg                                                                                  <  3:244610/149‑1 (MQ=255)                                                                    gCAGATCTTCTTCCTGTTCATTGTCATCAAGGTGCATCCGCGTTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGaa                                                                                >  1:223332/1‑148 (MQ=255)                                                                    gCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAAt                                                                              <  6:40935/149‑1 (MQ=255)                                                                    gCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAAt                                                                              <  6:371347/149‑1 (MQ=255)                                                                     cAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATa                                                                             <  3:318705/149‑1 (MQ=255)                                                                      aGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCACACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAg                                                                            >  8:324060/1‑149 (MQ=255)                                                                                 cTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACGCCCGGAAGCGAAATAGGAACCCGCCa                                                                  <  7:252122/148‑1 (MQ=255)                                                                                    ttCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGCGATGGCGCCGAGGGCCTTGAGTGGACGATACCCTCGCCTGCGCCCAACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGACCCCGCCATGaa                                                              >  6:187650/1‑149 (MQ=255)                                                                                        ttGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCTGAAGTGAAATAGGAACCCGCCATGAACGGc                                                          <  5:187650/149‑1 (MQ=255)                                                                                        ttGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGc                                                          <  1:57175/149‑1 (MQ=255)                                                                                        ttGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGc                                                          >  8:52167/1‑149 (MQ=255)                                                                                                   gTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTg                                                 >  5:51511/1‑148 (MQ=255)                                                                                                   gTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTg                                                 >  7:344553/1‑148 (MQ=255)                                                                                                       aTCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAAt                                                                              >  2:197009/1‑115 (MQ=255)                                                                                                       aTCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAAt                                                                              <  1:197009/115‑1 (MQ=255)                                                                                                       aTCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACg                                            >  1:158720/1‑149 (MQ=255)                                                                                                          cgcgGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACcac                                                                                                          >  6:278526/1‑84 (MQ=255)                                                                                                          cgcgGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACcac                                                                                                          <  5:278526/84‑1 (MQ=255)                                                                                                          cgcgGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCt                                         <  8:154340/149‑1 (MQ=255)                                                                                                                      ccGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCt                             >  8:317023/1‑149 (MQ=255)                                                                                                                      ccGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCt                             <  2:223332/149‑1 (MQ=255)                                                                                                                        ggCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCTGt                           <  1:84593/149‑1 (MQ=255)                                                                                                                            ccGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCTGTTGAt                       <  6:84006/149‑1 (MQ=255)                                                                                                                                ccAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGaa                                                                         >  4:303809/1‑95 (MQ=255)                                                                                                                                ccAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGaa                                                                         <  3:303809/95‑1 (MQ=255)                                                                                                                                  aaaCCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCTGTTGATGCTGAc                 <  2:158720/149‑1 (MQ=255)                                                                                                                                       cTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCTGTTGATGCTGACggtgg            >  5:57319/1‑149 (MQ=255)                                                                                                                                        tGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTgcgccatcccagggtttggccggtgccggcgcgccaccgcggatgcacttgatgacaatgaacaggaagaagatctgcgtggcgccgaacatgaacgcgccgatcga           <  6:78326‑M2/149‑108 (MQ=255)                                                                                                                                           gATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTgcgccatcccagggtttggccggtgccggcgcgccaccgcggatgcacttgatgacaatgaacaggaagaagatctgcgtggcgccgaacatgaacgcgccgatcgacga        <  5:229715‑M2/149‑111 (MQ=255)                                                                                                                                              ggCGCaggcgagggtatcgaccactcaaggccctcggcgccatcccagggtttggccggtgccggcgcgccaccgcggatgcacttgatgacaatgaacaggaagaagatctgcgtggcgccgaacatgaacgcgccgatcgacgacac     <  4:318705‑M1/149‑145 (MQ=255)                                                                                                                                               gcgcCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCTGTTGATGCTGACGGTGGTGATGTTc    <  2:126791/149‑1 (MQ=255)                                                                                                                                                 gcCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCTGTTGATGCTGACGGTGGTGATGTTCGc  <  6:51511/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                    ACTACAACCTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAA‑GTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCTGTTGATGCTGACGGTGGTGATGTTCGC  >  NC_002947/111353‑111644

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.