New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 235320 =69 (1.150)14 (0.250) 7/246 NT 17.7% intergenic (+17/+108) PP_0183/argH glutathione S‑transferase/argininosuccinate lyase
?NC_002947 235401 = 66 (1.190)intergenic (+98/+27) PP_0183/argH glutathione S‑transferase/argininosuccinate lyase

TGGCGGACTTCCCGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGC  >  NC_002947/235173‑235466
                                                                                                                                                    |                                                                                                                                                   
tGGCGGACTTCCCGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCtt                                                                                                                                                    >  6:43427/1‑149 (MQ=255)
  tgtttgccgtgctgacgctggaaggctcggtgaatgcgcgtgaccacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTc                                                                                                                                                   >  8:252983‑M1/147‑149 (MQ=255)
  gtttgccgtgctgacgctggaaggctcggtgaatgcgcgtgaccacattgggtggtacggcgccggcgcaggtgcgtgcggccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTc                                                                                                                                                   <  1:280115‑M1/3‑1 (MQ=255)
     gACTTCCCGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCgg                                                                                                                                               <  4:327888/149‑1 (MQ=255)
     gACTTCCCGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCgg                                                                                                                                               >  6:357555/1‑149 (MQ=255)
       gccgtgctgacgctggaaggctcggtgaatgcgcgtgaccacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCgg                                                                                                                                               >  8:247013‑M1/142‑148 (MQ=255)
        ccgtgctgacgctggaaggctcggtgaatgcgcgtgaccacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGc                                                                                                                                             >  3:169666‑M1/141‑149 (MQ=255)
         cgtgctgacgctggaaggctcggtgaatgcgcgtgaccacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgcgggcttcgccctcgTTCGCGGGCa                                                                                                                                            <  4:205766‑M1/10‑1 (MQ=255)
           ccGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGc                                                                                                                                         >  8:6318/1‑149 (MQ=255)
             gCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGccc                                                                                                                                       >  7:24836/1‑149 (MQ=255)
                  ccAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGcgaa                                                                                                                                  <  2:262752/149‑4 (MQ=255)
                  ccAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTcc                                                                                                                                  <  6:26477/149‑1 (MQ=255)
                      ggCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCACGGGCATGCCCGCTCCca                                                                                                                                >  3:68758/1‑147 (MQ=255)
                      gaaggctcggtgaatgcgcgtgaccacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCGtgcccgcgaacga                                                                                                                               >  2:140152‑M1/127‑143 (MQ=255)
                      gaaggctcggtgaatgcgcgtgaccacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCGtgcccgcgaacga                                                                                                                               >  5:8651‑M1/127‑143 (MQ=255)
                         gTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGt                                                                                                                           <  7:261081/149‑1 (MQ=255)
                              tgcAACTGATGGGGGAGAACCCGCACAGTGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTg                                                                                                                       >  1:206582/1‑148 (MQ=255)
                                      aTGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGttttt                                                                                                             <  7:6318/149‑1 (MQ=255)
                                         ggggAGAACCCGCACATGCCGCGGATCTTTGCTGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGa                                                                                                           <  8:76042/148‑1 (MQ=255)
                                          gggAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGaaa                                                                                                         >  5:88620/1‑149 (MQ=255)
                                           ggAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGGTGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAAc                                                                                                        >  1:81630/1‑149 (MQ=255)
                                             agaACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCACGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACtt                                                                                                      <  4:68758/149‑1 (MQ=255)
                                              cacattggtggtacggcgccgtcgcaggtgcgtgctgccgtcgttcgtgtcaaggcccttttggcttctcgctaatcccccaaggcgtgggcttcgccctcgTTCTCTGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACtt                                                                                                      >  7:272115‑M1/103‑149 (MQ=255)
                                              cacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCACGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACtt                                                                                                      >  3:142945‑M1/103‑149 (MQ=255)
                                               acattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACCGTTTTTGAAACtt                                                                                                      >  2:90299‑M1/102‑149 (MQ=255)
                                                 cccGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGc                                                                                                  <  8:24836/149‑1 (MQ=255)
                                                  ccGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCa                                                                                                 >  4:116720/1‑149 (MQ=255)
                                                  ccGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCa                                                                                                 >  2:254687/1‑149 (MQ=255)
                                                    gCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCAtt                                                                                               <  5:301600/149‑1 (MQ=255)
                                                    gCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCAt                                                                                                >  3:18348/1‑148 (MQ=255)
                                                    gCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCAt                                                                                                >  3:13267/1‑148 (MQ=255)
                                                    gCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCAt                                                                                                >  4:317563/1‑148 (MQ=255)
                                                          acggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCtg                                                                                          <  4:227016‑M1/59‑1 (MQ=255)
                                                            ggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCtgtg                                                                                        >  8:110684‑M1/89‑149 (MQ=255)
                                                            ggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCACGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACtt                                                                                                      >  3:245354‑M1/89‑135 (MQ=255)
                                                            ggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCACGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACtt                                                                                                      <  4:245354‑M1/47‑1 (MQ=255)
                                                             gcgcgggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcgcccactgcgagggcttcgccctcgTTCGCGGGCACGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTgg                                                                                       >  3:365364‑M1/88‑149 (MQ=255)
                                                             gcgccggcgcaggtgcgtgccgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccacggcgagggcttcgccctcgTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTgg                                                                                       >  2:280115‑M1/88‑149 (MQ=255)
                                                              gcgGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGcgaa                                                                                                                                  >  4:162871/1‑103 (MQ=255)
                                                              gcgGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGcgaa                                                                                                                                  <  3:162871/106‑4 (MQ=255)
                                                               cgGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTtgt                                                                                                    <  3:153143/134‑1 (MQ=255)
                                                               cgGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTtgt                                                                                                    >  4:153143/1‑134 (MQ=255)
                                                                         cGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGc                                                                           <  3:48571/149‑1 (MQ=255)
                                                                          ggACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGcc                                                                          >  3:47024/1‑149 (MQ=255)
                                                                           gACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGccc                                                                         >  7:106406/1‑149 (MQ=255)
                                                                                   ccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAAc                                                                   >  3:227016‑M1/66‑147 (MQ=255)
                                                                                   aGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAAc                                                                   >  8:73849/1‑147 (MQ=255)
                                                                                    cgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCACGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTgg                                                                                       <  7:262076‑M1/62‑1 (MQ=255)
                                                                                    cgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgTTCGCGGGCACGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTgg                                                                                       >  8:262076‑M1/65‑126 (MQ=255)
                                                                                     catccaTGCCGCCCTTCAGGCATAGCACCCGCAGCGCCACCCGCTGTGTCTGGTGGTCACCCCTCCCCGCCCATCCCCGCTCCCCCAGGTCTGCCCCGTTTTTTAAACTTGTCCTTTACCTGTGGTAGCGGGCGTGCCCGCGAACGAgg                                                               <  8:137412/144‑1 (MQ=255)
                                                                                     cGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAgg                                                               <  6:88620/149‑1 (MQ=255)
                                                                                      gTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCCCCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAggg                                                              <  5:357555/149‑1 (MQ=255)
                                                                                      gTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCAGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAggg                                                              >  2:274013/1‑149 (MQ=255)
                                                                                        cGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGct                                                            >  2:299615/1‑148 (MQ=255)
                                                                                          aTGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCAGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGATACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGaa                                                          <  1:274013/149‑1 (MQ=255)
                                                                                           tGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAg                                                         >  2:266379/1‑149 (MQ=255)
                                                                                            gCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGc                                                        >  7:336153/1‑149 (MQ=255)
                                                                                                   ttCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGcc                                                 >  5:278279/1‑149 (MQ=255)
                                                                                                     cATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCCCCGTTTTTGAAACTTGTGCATTACCGGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGTAGCCCTCGCCtt                                               >  1:156354/1‑149 (MQ=255)
                                                                                                     cATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCTTCGCCCTCgttc                                                <  1:299615/148‑4 (MQ=255)
                                                                                                      aTGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTTGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTg                                              >  5:233101/1‑149 (MQ=255)
                                                                                                       tGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTgg                                                                                       <  8:16103/107‑1 (MQ=255)
                                                                                                       tGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTgg                                                                                       >  7:16103/1‑107 (MQ=255)
                                                                                                       tGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCTTCGCCCTCgttcgcg                                             >  3:295376/1‑143 (MQ=38)
                                                                                                       tGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgg                                             <  2:206582/149‑1 (MQ=255)
                                                                                                        ggAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTTGATTAACTGTGGGAGCGGGCGTGCTCTCGAACGAGGGCGAAGCCCTCGGCGTggg                                            >  4:5177/1‑149 (MQ=39)
                                                                                                        ggAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCTTCGCCCTCgttcgcg                                             <  4:295376/148‑7 (MQ=38)
                                                                                                         gagaTGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTggg                                            <  3:317563/148‑1 (MQ=255)
                                                                                                         gagaTGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTggg                                            <  1:246434/148‑1 (MQ=255)
                                                                                                            aggatCCGCAGCGGCATGCGCTGAGGCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGa                                         <  4:80519/146‑1 (MQ=255)
                                                                                                             tgatCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGAtt                                       <  5:175728/149‑1 (MQ=255)
                                                                                                              gatCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGAt                                        >  8:311157/1‑147 (MQ=255)
                                                                                                              gatCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGAt                                        >  1:313352/1‑147 (MQ=255)
                                                                                                                tCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGc                                    <  2:81630/149‑1 (MQ=255)
                                                                                                                gccGCTGCGGCACGCGCGGAGTCGGGGGTTGCCCCCTGCGCGGGCATGCCCGCCCCCCCAGGGCTGCACCGTTTTTCAAACTTGTGCATTACCTGGGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGc                                    <  5:43427/148‑1 (MQ=255)
                                                                                                                 ccGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGc                                                                                                  <  6:20968/86‑1 (MQ=255)
                                                                                                                 ccGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGc                                                                                                  >  5:20968/1‑86 (MQ=255)
                                                                                                                 ccGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCg                                   >  2:260477/1‑149 (MQ=255)
                                                                                                                  cGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGc                                    >  5:377866/1‑147 (MQ=255)
                                                                                                                     aGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGAc                               <  3:77022/149‑1 (MQ=255)
                                                                                                                     aGCGGCAAGCGCTGAGGCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGGGGGAGCGGGCGTGCTCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGAc                               <  3:5177/149‑1 (MQ=255)
                                                                                                                           aaGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTgg                                                                                       <  8:209101/87‑1 (MQ=255)
                                                                                                                           aaGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTgg                                                                                       >  7:209101/1‑87 (MQ=255)
                                                                                                                            aGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACa                        <  7:73849/149‑1 (MQ=255)
                                                                                                                               gcTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAggg                     <  1:254687/149‑1 (MQ=255)
                                                                                                                                       tGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGGCCCGTTTTTGAAACTTGTGGATTACCGGTGGGAGCGGGCGGGGCCGCGCACGCGGGCGAAGCCCGCGCCGTGGGGGATTAGCGAGACGCCAACAGGGCCTTGccc             >  6:252008/1‑148 (MQ=255)
                                                                                                                                       tGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAgg                                                               <  4:247732/99‑1 (MQ=255)
                                                                                                                                       tGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAgg                                                               >  3:247732/1‑99 (MQ=255)
                                                                                                                                       tGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCa             >  2:58449/1‑149 (MQ=255)
                                                                                                                                               aGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAacgac     <  7:311157/149‑1 (MQ=255)
                                                                                                                                               aGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAacgac     <  3:116720/149‑1 (MQ=255)
                                                                                                                                                gCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAacgacg    <  8:106406/149‑1 (MQ=255)
                                                                                                                                                 cccTTCGGGGGCATGCCCGAGCCCACAGGTGTCCACCTTTTTTTAACCTTGTGCATTACCTGTGGTTGGGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACgg   <  6:233101/149‑1 (MQ=255)
                                                                                                                                                  ccTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGGGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGgc  <  2:313352/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TGGCGGACTTCCCGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGC  >  NC_002947/235173‑235466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.