New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 608687 =80 (1.330)6 (0.100) 6/258 NT 7.0% coding (558/813 nt) PP_0524 cobalamin‑binding protein HutB
?NC_002947 608720 = 81 (1.390)coding (591/813 nt) PP_0524 cobalamin‑binding protein HutB

CCCTGCGTGAGCGGCTGCAGCAGCTGCGCCAGCAGTATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCGCAGATTCGGGCGGTGGCTGATGGG  >  NC_002947/608539‑608831
                                                                                                                                                    |                                                                                                                                                    
gcgctccagccctttgtccggcaccaccagcagacgcccatcagccaccgcccgaatctgcggccaggccttccagctggccagttgcgcctcatcagcggccaggatgacctgcggattacgcagcagcacggactctacattcacct                                                                                                                                                      >  5:374750‑M1/149‑149 (MQ=255)
gcgctccagccctttgtccggcaccaccagcagacgcccatcagccaccgcccgaatctgcggccaggccttccagctggccagttgcgcctcatcagcggccaggatgacctgcggattacgcagcagcacggactctacattcacct                                                                                                                                                      <  5:28238‑M1/1‑1 (MQ=255)
cccTGCGTGAGCGGCTGCAGCAGCTGCGCCAGCAGTATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAAt                                                                                                                                                      <  3:61477/149‑1 (MQ=255)
     cGTGAGCGGCTGCAGCAGCTGCGCCAGGAGTATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAAtgtg                                                                                                                                                   <  6:299519/147‑1 (MQ=255)
     cGTGAGCGGCTGCAGCAGCTGCGCCAGCAGTATCGGCGTCACGAACCCTTGCAGCTGTTATATCAAGTCTGGGATCGGACGTTGTACACGCTCGGTGTCCGCCAGCTGGTGACCGACGCCCTGGCCGTGTGCGGCGCGAGCAATgtgta                                                                                                                                                 >  8:30300/1‑148 (MQ=255)
           cGGCTGCAGCAGCTGCGCCAGCAGTATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGa                                                                                                                                           >  4:166240/1‑149 (MQ=255)
              cTGCAGCAGCTGCGCCAGCAGTATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGAACGGCCGTTGTACACGCTCGGTGGCCGCCAGCTCGTGACAGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCt                                                                                                                                        >  4:56171/1‑149 (MQ=255)
                 cagcagCTGCGCCAGCAGTATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTgg                                                                                                                                     >  1:101506/1‑149 (MQ=255)
                    cagcTGCGCCAGCAGTATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGc                                                                                                                                    >  3:89210/1‑147 (MQ=255)
                    cagcTGCGCCAGCAGTATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGc                                                                                                                                    >  5:34168/1‑147 (MQ=255)
                     agcTGCGCCAGCAGTATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑g                                                                                                                               >  2:307903/1‑149 (MQ=255)
                     agcTGCGCCAGCAGTATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑g                                                                                                                               >  2:179182/1‑149 (MQ=255)
                             cagcagTATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGgcgc                                                                                                                        >  6:108084/1‑148 (MQ=255)
                             cagcagTATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGgcgc                                                                                                                        >  6:290564/1‑148 (MQ=255)
                              agcagTATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCca                                                                                                                     >  2:3331/1‑149 (MQ=255)
                               agacgcccatcagccaccgcccgaatctgcggccaggccttccagctggccagttgcgcctcatcagcggccaggatgacctgcggattacgcagcagcacggactctacattcaccTGTGGCGCCGACCTTGGCCA‑‑GCCGGCGCcaca                                                                                                                   >  3:186946‑M1/118‑149 (MQ=255)
                                 agTATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAg                                                                                                                  <  4:266812/149‑1 (MQ=255)
                                   tATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGt                                                                                                                <  5:290564/149‑1 (MQ=255)
                                   tATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGt                                                                                                                >  1:168251/1‑149 (MQ=255)
                                     tCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTg                                                                                                               >  4:57704/1‑148 (MQ=255)
                                     tCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGa                                                                                                              <  5:245389/149‑1 (MQ=255)
                                       ggCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAAt                                                                                                            <  3:57704/149‑1 (MQ=255)
                                       atcagccaccgcccgaatctgcggccaggccttccagctggccagttgcgcctcatcagcggccaggatgacctgcggattacgcagcagcacggactctacattcaccTGTGGCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATg                                                                                                           <  4:324074‑M1/40‑1 (MQ=255)
                                        tcagccaccgcccgaatctgcggccaggccttccagctggccagttgcgcctcatcagcggccaggatgacctgcggattacgcagcagcacggactctacattcaccTGTGGCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGt                                                                                                          >  3:324074‑M1/109‑149 (MQ=255)
                                        gCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATg                                                                                                           >  2:100567/1‑149 (MQ=255)
                                          gTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTa                                                                                                         <  1:217094/149‑1 (MQ=255)
                                          gTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTa                                                                                                         <  8:18105/149‑1 (MQ=255)
                                             aCGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTa                                                                                                         >  4:48481/1‑146 (MQ=255)
                                               gAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAAt                                                                                                                                                      >  4:40484/1‑102 (MQ=255)
                                               gAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAAt                                                                                                                                                      <  3:40484/102‑1 (MQ=255)
                                                 aCCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATg                                                                                                           >  4:205746/1‑140 (MQ=255)
                                                 aCCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATg                                                                                                           <  3:205746/140‑1 (MQ=255)
                                                 aCCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCg                                                                                                  <  5:171848/149‑1 (MQ=255)
                                                  cccTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGt                                                                                                 <  2:101506/149‑1 (MQ=255)
                                                   ccTTGCAGGTGCTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGtg                                                                                                <  5:333843/149‑1 (MQ=255)
                                                    cTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTTACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGtgc                                                                                               >  1:184768/1‑149 (MQ=255)
                                                           gtgtTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCg                                                                                        >  4:358424/1‑149 (MQ=255)
                                                             gtTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGt                                                                                       >  3:119917/1‑148 (MQ=255)
                                                             ggccaggccttccagctggccagttgcgcctcatcagcggccaggatgacctgcggattacgcagcagcacggactctacattcaccTGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCcac                                                                                                                    <  8:155375‑M1/32‑1 (MQ=255)
                                                             ggccaggccttccagctggccagttgcgcctcatcagcggccaggatgacctgcggattacgcagcagcacggactctacattcaccTGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCcac                                                                                                                    >  7:155375‑M1/88‑119 (MQ=255)
                                                              ttttATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCGCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTaa                                                                                     >  4:210651/1‑149 (MQ=255)
                                                              ttttATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTaa                                                                                     >  5:84036/1‑149 (MQ=255)
                                                              ttttATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTaa                                                                                     >  6:59322/1‑149 (MQ=255)
                                                                 tATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATcc                                                                                 >  1:291797/1‑149 (MQ=255)
                                                                  aTCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCg                                                                                >  5:279004/1‑149 (MQ=255)
                                                                   tCAAGTCTGGGATCGGCCGTTGTACACGCTGGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTTCGTGGCGCGCATTGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCAGAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGc                                                                               <  7:30300/149‑1 (MQ=255)
                                                                   tCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCg                                                                                <  3:48481/148‑1 (MQ=255)
                                                                    cAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCg                                                                                >  2:296508/1‑147 (MQ=255)
                                                                     aaGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAg                                                                             <  2:78445/149‑1 (MQ=255)
                                                                     aaGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGGGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAg                                                                             <  4:289043/149‑1 (MQ=255)
                                                                      aGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAgg                                                                            >  2:46075/1‑149 (MQ=255)
                                                                            ggATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATcc                                                                      >  2:117872/1‑149 (MQ=255)
                                                                              aTCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTg                                                                    >  4:213766/1‑149 (MQ=255)
                                                                                 ggCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGcc                                                                 >  5:258606/1‑149 (MQ=255)
                                                                                 ggCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGc                                                                  <  2:291797/148‑1 (MQ=255)
                                                                                  gCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCg                                                                >  5:171029/1‑149 (MQ=255)
                                                                                  gCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAACGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCg                                                                >  3:227256/1‑149 (MQ=255)
                                                                                    cGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCt                                                              >  8:319314/1‑149 (MQ=255)
                                                                                    cGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCt                                                              >  5:173810/1‑149 (MQ=255)
                                                                                      ttGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCtga                                                            <  3:81531/149‑1 (MQ=255)
                                                                                        gTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCtgat                                                           <  6:173810/148‑1 (MQ=255)
                                                                                           cacGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCCGCAGGTCATCCTGGCCGCTGATGAg                                                        <  1:3331/149‑1 (MQ=255)
                                                                                           cacGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAg                                                        <  1:100567/148‑1 (MQ=255)
                                                                                           cacGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAg                                                        <  8:95562/148‑1 (MQ=255)
                                                                                           cacGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAg                                                        <  1:179182/148‑1 (MQ=255)
                                                                                            acGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGgc                                                      <  6:34168/149‑1 (MQ=255)
                                                                                            acGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGgc                                                      <  4:89210/149‑1 (MQ=255)
                                                                                             cGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGgcg                                                     <  5:108084/149‑1 (MQ=255)
                                                                                              gCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCtgat                                                           <  5:162797/142‑1 (MQ=255)
                                                                                              gCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCtgat                                                           >  6:162797/1‑142 (MQ=255)
                                                                                                      gccgccAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGcc                                            <  6:171029/149‑1 (MQ=255)
                                                                                                        cgccAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAg                                          >  2:168751/1‑149 (MQ=255)
                                                                                                            aGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTAATGAGGCGCAACTGGCCAGCTgg                                      <  6:84036/149‑1 (MQ=255)
                                                                                                                 gtgACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGc                                 <  6:385404/149‑1 (MQ=255)
                                                                                                                    aCCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCt                               <  4:119917/148‑1 (MQ=255)
                                                                                                                    aCCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCt                               <  6:258606/148‑1 (MQ=255)
                                                                                                                      cGACGCCCTGGCCGTGTGCGGGGCGCGCAAAGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGc                            >  1:33008/1‑149 (MQ=255)
                                                                                                                        aCGCGCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCg                          <  3:210651/149‑1 (MQ=255)
                                                                                                                        aCGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCg                          >  4:304572/1‑149 (MQ=255)
                                                                                                                           cccTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCg                          >  2:154125/1‑146 (MQ=255)
                                                                                                                            ccTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCg                          >  7:184960/1‑145 (MQ=255)
                                                                                                                              tGGCCGTGTGCGGGGCGCGCAATGTGTTGGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCGCAGAtt                    >  1:210550/1‑149 (MQ=255)
                                                                                                                                gCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCGCAGATTc                   <  1:154125/148‑1 (MQ=255)
                                                                                                                                 cacggactctacattcaccTGTGGCGCCGGC‑‑TGGCCAAGGTCGGCGAACACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCGCGGATTCgg                 <  5:303312‑M1/130‑1 (MQ=255)
                                                                                                                                  cGTGTGCGGGGCGCGCAATGTGTTCGCCGAACTTGGCCA‑‑GACGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGATGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGTCCGCAGATTCggg                >  6:28238/1‑149 (MQ=255)
                                                                                                                                      tgCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCGCAGATTCGGGCGGt            <  2:33008/149‑1 (MQ=255)
                                                                                                                                       gCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCGCAGATTCGGGCGGTg           <  2:184768/149‑1 (MQ=255)
                                                                                                                                        cGGGGCGCTCTATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACTGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCGAGCTTGAAGGCCTGGCCGCAGATTCGGGCGGTgg          <  3:56171/149‑1 (MQ=255)
                                                                                                                                         ggggCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTAGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCGCAGATTCGGGCGGTGGc         >  8:122141/1‑149 (MQ=255)
                                                                                                                                            gcgcgcAACGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCGCAGATTCGGGCGGTGGCTGa      <  4:227256/149‑1 (MQ=255)
                                                                                                                                             cgcgcAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCGCAGATTCGGGCGGTGGCTGAt     >  2:162540/1‑149 (MQ=255)
                                                                                                                                             cgcgcAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCGCAGATTCGGGCGGTGGCTGAt     <  1:168751/149‑1 (MQ=255)
                                                                                                                                             cgcgcAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCGCAGATTCGGGCGGGGGCTGAt     <  7:319314/149‑1 (MQ=255)
                                                                                                                                               cgcAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCGCAGATTCGGGCGGTGGCTGATgg   <  2:210550/149‑1 (MQ=255)
                                                                                                                                                gcAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGATTGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAGCTGGCCAGCTGGAAGGCCTGGCCGCAGATTCGGGCGGTGGCTGATggg  >  4:215308/1‑149 (MQ=255)
                                                                                                                                                gcAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTg                              <  3:273239/121‑1 (MQ=255)
                                                                                                                                                gcAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTg                              >  4:273239/1‑121 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CCCTGCGTGAGCGGCTGCAGCAGCTGCGCCAGCAGTATCGGCGTGACGAACCCTTGCAGGTGTTTTATCAAGTCTGGGATCGGCCGTTGTACACGCTCGGTGGCCGCCAGGTGGTGACCGACGCCCTGGCCGTGTGCGGGGCGCGCAATGTGTTCGCCGACCTTGGCCA‑‑GCCGGCGCCACAGGTGAATGTAGAGTCCGTGCTGCTGCGTAATCCGCAGGTCATCCTGGCCGCTGATGAGGCGCAACTGGCCAGCTGGAAGGCCTGGCCGCAGATTCGGGCGGTGGCTGATGGG  >  NC_002947/608539‑608831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.