New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	862151 =	40 (0.660)	3 (0.050)	3/252	NT	7.3%	coding (204/906 nt)	yfcH	NAD(P)‑binding Rossmann‑fold domain‑containing protein
	?	NC_002947	862192 =	38 (0.670)					coding (245/906 nt)	yfcH	NAD(P)‑binding Rossmann‑fold domain‑containing protein

CTGGCTGGGCCAAGGGCATCGGCTTACGGTTTGGAGCAGGCGTCCTGAACAGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCACCCGTGAGCAGCGCCCGGAGGTGTTGATCTCCGGCTCTGCGGTAGGTTG  >  NC_002947/862004‑862297                                                                                                                                                      |                                                                                                                                                     ctggctggGCCAAGGGCATCGGCTTACGGTTTGGAGCAGGCGTCCTGAACAGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTg                                                                                                                                                     <  6:129804/149‑1 (MQ=255) ctggctggGCCAAGGGCATCGGCTTACGGTTTGGAGCAGGCGTCCTGAACAGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGCCAACCTTGCCGGt                                                                                                                                                      <  4:71670/148‑1 (MQ=255)    gctggGCCAAGTGCATCGGCTTACGGTTTGGAGGAGGCTTCCTGAACTGGTGGCGAAAATCTGTGGTAGCGGGGTTCTTGGTTTCGCGCGCCTGGACTCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGt                                                                                                                                                      <  1:275328/146‑1 (MQ=255)    gctggGCCAAGGGCATCGGCTTACGGTTTGGAGCAGGCGTCCTGAACAGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTAAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGt                                                                                                                                                      >  2:275328/1‑145 (MQ=255)        ggCCAAGGGCATCGGCTTACGGTTTGGAGCAGGCGTGCTGAACAGGTGGCGAATATCTGTGGTAGCGGGGTGCGTGGTATCGGGCGCCTGGA‑GCAGTTAGAAGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCg                                                                                                                                                <  1:82398/148‑1 (MQ=255)        gcctcggtcagttcgcgttcgccaccgtctccgtaccaacctaccgcagagccggagatcaacacctccgggcgctgctcacgggtgcccaaccaagccagcaattgctcggtaagggtgacacggctggcccacagcacgtTGCGCCg                                                                                                                                                <  5:311169‑M1/7‑1 (MQ=255)           cAAGGGCATCGGCTTACGGTTTGGAGCAGGCGTCCTGAACAGGTGGCGAAAATCTGTTGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGc                                                                                                                                           >  5:186173/1‑149 (MQ=255)           cAAGGGCATCGGCTTACGGTTTGGAGCAGGCGTCCTGAACAGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGc                                                                                                                                           <  5:228378/149‑1 (MQ=255)                 cATCGGCTTACGGTTTGGAGCAGGCGTCCTGAACAGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAg                                                                                                                                     <  6:311844/149‑1 (MQ=255)                      gCTTACGGTTTGGAGCAGGCGTCCTGAACAGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCt                                                                                                                                <  3:350226/149‑1 (MQ=255)                         tACGGTTTGGAGCAGGCGTCCTGAACAGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑Ga                                                                                                                            >  7:319918/1‑149 (MQ=255)                            ggTTTGGAGCAGGCGTCCTGAACAGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACgg                                                                                                                         <  6:359809/149‑1 (MQ=255)                                tGGAGCAGGCGTCCTGAACAGGTGGCGAAAATCTGTTGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGgccg                                                                                                                      <  6:186173/148‑1 (MQ=255)                                         cGTCCTGAACAGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGGCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCaa                                                                                                            >  8:68170/1‑149 (MQ=255)                                           tCCTGAACAGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACg                                                                                                          >  3:241193/1‑149 (MQ=255)                                              tGAACAGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑c                                                                                                      >  1:49898/1‑149 (MQ=255)                                               gAACAGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑Ct                                                                                                     >  2:323654/1‑149 (MQ=255)                                               gAACAGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑Ct                                                                                                     >  8:88297/1‑149 (MQ=255)                                                aaCAGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑c                                                                                                      <  2:365766/147‑1 (MQ=255)                                                   ccgcagagccggagatcaacacctccgggcgctgctcacgggtgcccaaccaagccagcaattgctcggtaagggtgacacggctggcccacagcacgtTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑Ct                                                                                                     >  4:26237‑M1/100‑147 (MQ=255)                                                   aGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTGCGACGGCCGCCCGGCGCAACGTG‑Ctgtg                                                                                                  <  1:206696/149‑1 (MQ=255)                                                       ggCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCa                                                                                             <  1:197046/149‑1 (MQ=255)                                                          gAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGcc                                                                                          >  8:250879/1‑149 (MQ=255)                                                          gAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GAAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCAGACAGGCCCTG‑GACgg                                                                                                                         >  7:142785/1‑119 (MQ=255)                                                            aaaTCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCgt                                                                                        <  8:319918/149‑1 (MQ=255)                                                            aaaTCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCgt                                                                                        <  4:241193/149‑1 (MQ=255)                                                             ggagatcaacacctccgggcgctgctcacgggtgcccaaccaagccagcaattgctcggtaagggtgacacggctggcccacagcacgtTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACg                                                                                                          <  1:210280‑M1/44‑1 (MQ=255)                                                             ggagatcaacacctccgggcgctgctcacgggtgcccaaccaagccagcaattgctcggtaagggtgacacggctggcccacagcacgtTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACg                                                                                                          >  2:210280‑M1/90‑133 (MQ=255)                                                                     gTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCt                                                                                >  2:350573/1‑148 (MQ=255)                                                                           gggTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAg                                                                         >  2:160131/1‑149 (MQ=255)                                                                                    gTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCt                                                                 <  7:68170/148‑1 (MQ=255)                                                                                       tCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCt                                                             >  7:178639/1‑149 (MQ=255)                                                                                             gcCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCttggttg                                                       <  1:323654/149‑1 (MQ=255)                                                                                                       aggtAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCACCCGt                                              <  2:223424/146‑1 (MQ=255)                                                                                                       aGTTAG‑AGGCCGACGATCATCTTGATGCTGTGGTCAACCTTGCAGGTGCGGCTATTGCCGAAAGGCCCTG‑GACGGCCGCCCGTGGCAACGTG‑CTGTGGGCCAGGCGTGTCACCCTTACGGAGCAATTGCTTGCTTGGTTGGGCACCCGt                                              <  7:317859/149‑1 (MQ=255)                                                                                                        gTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCACCCGTg                                             <  8:178639/149‑1 (MQ=255)                                                                                                         ttAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCAccc                                                >  1:286106/1‑145 (MQ=255)                                                                                                         ttAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCAccc                                                <  2:286106/145‑1 (MQ=255)                                                                                                          tAG‑TGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACCGCCGCCCGGCGCAACGTGCCTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCACCCGTg                                             <  1:289597/148‑1 (MQ=255)                                                                                                            g‑agGCCGACGATAATCTTGATGCGGTGGGCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCACCCGTGagc                                          <  4:194143/148‑1 (MQ=255)                                                                                                                gCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCACCCGTGAGCAgcg                                      >  6:311169/1‑149 (MQ=255)                                                                                                                gCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCACCCGTGAGCAgcg                                      >  1:362700/1‑149 (MQ=255)                                                                                                                  cgacgaTCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCAc                                                  <  7:322684/135‑1 (MQ=255)                                                                                                                  cgacgaTCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCAc                                                  >  8:322684/1‑135 (MQ=255)                                                                                                                               gATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCACCCGAGAGCAGCGCCCGGAGgtgt                           <  2:49898/145‑1 (MQ=255)                                                                                                                                     gtggtCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCACCCGTGAGCAGCGCCCGGAGGTGTTGATCTCCgg                 <  1:301357/149‑1 (MQ=255)                                                                                                                                     gtggtCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCACCCGTGAGCAGCGCCCGGAGGTGTTGATCTCCgg                 <  1:350573/149‑1 (MQ=255)                                                                                                                                               ttGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCACCCGTGAGCAGCGCCCGGAGGTGTTGATCTCCGGCTCTGCgg         >  3:113511/1‑147 (MQ=255)                                                                                                                                                 tacGGTGATCCGATTTCCGACAGGAACAT‑TACCTCCGCCCGCCGCAACGTT‑CTGTGTGCCATCCGTGTCACCATTACCGAGCAATTGATGGCTTGGTTGTTCAACCTTGATCAGCGACCGGAGGTGTTGATCTCCGGCTCTGCGGTAgg     >  4:162404/3‑149 (MQ=255)                                                                                                                                                    ggTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCAGCCTTACCGAGCAATTGCTGGCTTGGTTGGGCACCCGTGAGCAGCGCCCGGAGGTGTTGATCTCCGGCTCTGCGGTAGGTTg  >  7:290787/1‑149 (MQ=255)                                                                                                                                                    ggTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCACCCGTGAGCAGCGCCCGGAGGTGTTGATCTCCGGCTCTGCGGTAGGTTg  <  7:250879/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CTGGCTGGGCCAAGGGCATCGGCTTACGGTTTGGAGCAGGCGTCCTGAACAGGTGGCGAAAATCTGTGGTAGCGGGGTGCGTGGTATCGCGCGCCTGGA‑GCAGTTAG‑AGGCCGACGATCATCTTGATGCGGTGGTCAACCTTGCCGGTGCGCCGATTGCCGACAGGCCCTG‑GACGGCCGCCCGGCGCAACGTG‑CTGTGGGCCAGCCGTGTCACCCTTACCGAGCAATTGCTGGCTTGGTTGGGCACCCGTGAGCAGCGCCCGGAGGTGTTGATCTCCGGCTCTGCGGTAGGTTG  >  NC_002947/862004‑862297

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.