New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1204282	57 (0.950)	3 (0.050)	3/256	NT	5.0%	coding (625/645 nt)	gspN	type II secretion pathway protein GspN
	?	NC_002947	= 1204318	59 (1.020)					intergenic (+16/+144)	gspN/PP_1056	type II secretion pathway protein GspN/iron‑chelator utilization protein

CGCAGCAAGGGCAACATCAACTGACCGTGGATGCCGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCA  >  NC_002947/1204139‑1204430                                                                                                                                                 |                                                                                                                                                      cgcAGCAAGGGCAACATCAACTGACCGTGGATGCCGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCga                                                                                                                                                  <  1:161885/149‑1 (MQ=255)   cagcaAGGGCAACATCAACTGACCGTGGATGCCGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCgaga                                                                                                                                                >  5:338729/1‑149 (MQ=255)    agcaAGGGCAACATCAACTGACCGTGGATGCCGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGAc                                                                                                                                               <  8:228993/149‑1 (MQ=255)     gcaAGGGCAACATCAACTGACCGTGGATGCCGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGAcc                                                                                                                                              >  8:162528/1‑149 (MQ=255)        aGGGCAACATGAACTGACGGTGGATGGCGAGCTGCCAGGACGCCAGGTGCAGGTCGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGCCGCCATTGTTGGGGGGTGCTCATAGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCATc                                                                                                                                           <  3:49708/149‑1 (MQ=255)        aGGGCAACATCAACTGACCGTGGATGCCGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCCGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTc                                                                                                                                           <  3:49704/149‑1 (MQ=255)          ggCAACATCAACTGACCGTGGATGCCGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGt                                                                                                                                         <  7:141776/149‑1 (MQ=255)           gCAACATCAACTGACCGTGGATGCCGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGtt                                                                                                                                        <  8:200797/149‑1 (MQ=255)               cATCAACTGACCGTGGATGCCGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCCCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGt                                                                                                                                         >  6:118357/1‑144 (MQ=255)               cATCAACTGACCGTGGATGCCGACCTGCCAGGACGCCAGGTGCAGGTGGTGTGCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCCCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGt                                                                                                                                         <  5:118357/144‑1 (MQ=255)                aTCAACTGACCGTGGATGCCGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGt                                                                                                                                     >  1:202627/1‑147 (MQ=255)                      tGACCGTGGATGCCGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGcaac                                                                                                                              >  1:359720/1‑148 (MQ=255)                          cGTGGATGCCGACCTGGCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGt                                                                                                                         <  4:224185/149‑1 (MQ=255)                          cGTGGATGCCGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGt                                                                                                                         <  2:359720/149‑1 (MQ=255)                           gTGGATGCCGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTg                                                                                                                        <  6:338729/149‑1 (MQ=255)                               aTGCCGACCTGCCTGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCGTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGgcgc                                                                                                                    <  7:241046/149‑1 (MQ=255)                                 gCCGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCAGGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGATTGGACCGCAGGCCCTGGCGGGGCAGCGAGAACTTCGTTGGTAAGCAACACCGTGGcgc‑g                                                                                                                  >  1:76941/1‑149 (MQ=255)                                     aCCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCcgcgccacgttgttgcttaccaacgaaggtctcgctgcccc                                                                                                              <  8:310056‑M1/149‑42 (MQ=255)                                          ccAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTg                                                                                                          >  8:348964/1‑147 (MQ=255)                                          ccAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTa                                                                                                        <  3:112634/149‑1 (MQ=255)                                             ggACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGAt                                                                                                     <  7:348964/149‑1 (MQ=255)                                                cGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGCCGC‑GGCCCCCTGTAGATAgg                                                                                                  >  1:335835/1‑149 (MQ=255)                                                   caggtgcaggtgGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTg                                                                                               <  3:303715/149‑1 (MQ=255)                                                      gtgcaggtgGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGTGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTg                                                                                            >  3:182484/1‑149 (MQ=255)                                                              ggtgTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTc                                                                                      >  5:153535/1‑147 (MQ=255)                                                                    ccAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCtttt                                                                              >  2:160068/1‑149 (MQ=255)                                                                     cAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCCGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTc                                                                             <  1:120047/149‑1 (MQ=255)                                                                      aGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCGCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCt                                                                            <  3:66144/149‑1 (MQ=255)                                                                       gCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCtttt                                                                              >  8:75724/1‑146 (MQ=255)                                                                       gCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCtttt                                                                              <  7:75724/146‑1 (MQ=255)                                                                       gCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCt                                                                            >  8:47441/1‑148 (MQ=255)                                                                               ccTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCt                                                                    >  3:298465/1‑149 (MQ=255)                                                                                  gAAGCGCAGTTGACTCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCcgcgccacgttgttgcttaccaacgaaggtctcgctgccccg                                                                                                             <  4:238333‑M1/106‑43 (MQ=255)                                                                                  gAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCcgcgccacgttgttgcttaccaacgaaggtctcgctgccccg                                                                                                             >  3:238333‑M1/1‑64 (MQ=255)                                                                                  gAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGTGGTCGAGCTTTTCTGAGGTGCTTgg                                                                 >  2:153350/1‑149 (MQ=255)                                                                                   aaGCGCAGTTGACGCCATTGTTGCGTGGGGCTCACTTGCGTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACTTGGCGCTGCCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCtt                                                                   <  8:73156/147‑1 (MQ=255)                                                                                   aaGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTg                                                                  <  7:162528/147‑1 (MQ=255)                                                                                         aGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGt                                                                                                         >  5:120152/1‑102 (MQ=255)                                                                                         aGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGt                                                                                                         <  6:120152/102‑1 (MQ=255)                                                                                              aCGCCATTGGTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCt                                                     <  6:373772/149‑1 (MQ=255)                                                                                               cGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCtt                                                    <  4:298465/149‑1 (MQ=255)                                                                                                gCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTg                                                   >  3:333129/1‑149 (MQ=255)                                                                                                  cATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGt                                                 <  6:153535/149‑1 (MQ=255)                                                                                                       ttgCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTAt                                            <  1:160068/149‑1 (MQ=255)                                                                                                          cGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCa                                          >  8:245733/1‑148 (MQ=255)                                                                                                             ggggCTGTATGGCGTGGTCCGCAGGCACTGGGGGGGCAGCGAGAGGTTCGTTGGTATGCAACAACGTGGCGG‑GTGCCCCTGTAGATAGGCTGTTGGCGTTGGAGATTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCTAATg                                      <  2:76941/149‑1 (MQ=255)                                                                                                               ggCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGTGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGt                                    <  2:202627/149‑1 (MQ=255)                                                                                                                   cAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTa                                 >  7:243539/1‑148 (MQ=255)                                                                                                                    aaTGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTAt                                            >  6:291593/1‑136 (MQ=255)                                                                                                                    aaTGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTAt                                            <  5:291593/136‑1 (MQ=255)                                                                                                                        gCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCACTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATCGTTTAAACcgc                           >  3:252455/1‑149 (MQ=255)                                                                                                                         cTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGttt                                  >  5:198496/1‑141 (MQ=255)                                                                                                                         cTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGttt                                  <  6:198496/141‑1 (MQ=255)                                                                                                                         cTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGtt                                   >  8:177702/1‑140 (MQ=255)                                                                                                                         cTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGtt                                   <  7:177702/140‑1 (MQ=255)                                                                                                                         cTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACcgc                           >  7:147809/1‑148 (MQ=255)                                                                                                                          ttGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACcgcg                          >  7:27824/1‑148 (MQ=255)                                                                                                                                cGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAgg                   <  3:105498/149‑1 (MQ=255)                                                                                                                                  cAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCt                 >  7:54981/1‑149 (MQ=255)                                                                                                                                     gCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTgcg              >  4:194228/1‑149 (MQ=255)                                                                                                                                           gCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCttt          <  7:47441/147‑1 (MQ=255)                                                                                                                                            cGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑Ggccccgccagggcctgcggtccaagccattgagccccacgcaacaatggcgtcaactgcgcttc                                                  >  3:238333‑M2/1‑42 (MQ=255)                                                                                                                                            cGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑Ggccccgccagggcctgcggtccaagccattgagccccacgcaacaatggagtcaactgcgcttc                                                  <  4:238333‑M2/106‑65 (MQ=255)                                                                                                                                             ggggCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑Ggccccgccagggcctgcggtccaagccattgagccccacgcaacaatggcgtcaactgcgcttcaggctgcagctggaacaccacctgcacctggcgtcctggcaggt      <  8:310056‑M2/149‑109 (MQ=255)                                                                                                                                             ggggCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGt      >  2:31208/1‑149 (MQ=255)                                                                                                                                                gCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTCAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGCTTTAAACCGCGAAGCAGCCTGCGCTATGCGTgg    >  7:273957/1‑148 (MQ=255)                                                                                                                                                 cAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCa  >  7:135496/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                      CGCAGCAAGGGCAACATCAACTGACCGTGGATGCCGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCA‑GCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGC‑GGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCA  >  NC_002947/1204139‑1204430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.