New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1520999	65 (1.080)	4 (0.070)	4/252	NT	6.3%	coding (256/1353 nt)	murD	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
	?	NC_002947	= 1521021	58 (1.020)					coding (278/1353 nt)	murD	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase

TCGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGCCGCC  >  NC_002947/1520853‑1521145                                                                                                                                                     |                                                                                                                                                    tCGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑g                                                                                                                                                  >  8:198203/1‑149 (MQ=255)  cGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑gg                                                                                                                                                 <  1:325178/149‑1 (MQ=255)   gCCGATACCCGCGAGCAGCCGCTGAAAGTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGGGCTGAGGTGAACTGGACGTGGACTACCTG‑‑TGCCGCGCCAACGCGCTGTACGTGAGCCCCGGCAAGGCGTTGGCCACGCC‑GGc                                                                                                                                                >  7:58051/1‑149 (MQ=255)   gCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCgcgg                                                                                                                                                 >  1:94661‑M1/1‑145 (MQ=255)   gCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGc                                                                                                                                                >  6:295620/1‑149 (MQ=255)   gCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGc                                                                                                                                                <  4:309298/149‑1 (MQ=255)     cGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCt                                                                                                                                              >  4:299777/1‑149 (MQ=255)      gATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCtt                                                                                                                                             <  6:89332/149‑1 (MQ=255)          cccGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTgcag                                                                                                                                         <  6:74953/149‑1 (MQ=255)            cgcgAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTgcag                                                                                                                                         >  6:147236/1‑147 (MQ=255)            cgcgAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTgcag                                                                                                                                         >  2:119586/1‑147 (MQ=255)                       gccgGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCgc                                                                                                                            >  2:243121‑M2/1‑147 (MQ=255)                            aaCTGGAAACCGTGCGCCGTGATTACCCTCAGGTGGAAGTGCGCTGTTGTGAACTGGAGGTGGACTTCCTG‑‑TGCCGCGACAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCgcggcagcctgctgcaagtccggcgtg                                                                                                                          <  3:89504‑M1/147‑28 (MQ=255)                            aaCTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGTCCACGCC‑GGCCTTGCAGCAGGCTg                                                                                                                                  >  1:324249/1‑138 (MQ=255)                            aaCTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGTCCACGCC‑GGCCTTGCAGCAGGCTg                                                                                                                                  <  2:324249/138‑1 (MQ=255)                            aaCTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCt                                                                                                                                   >  7:286446/1‑137 (MQ=255)                            aaCTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCt                                                                                                                                   <  8:286446/137‑1 (MQ=255)                               tGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCgcggcagcctgctgcaaggccggcgtggcc                                                                                                                       >  5:351349‑M1/1‑117 (MQ=255)                                ggAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCgcgtggcgtg                                                                                                                    >  2:33337/1‑148 (MQ=255)                                 gcaaCCCTGCGCCGTTAGTAACCGCAGGTGGAATGGCGCTGTGGTGAACTGGACGGTGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGa                                                                                                                   <  8:351586/146‑1 (MQ=255)                                 gAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCgcggcagcctgctgcaaggccggcgtggccaagg                                                                                                                   <  2:94661‑M1/149‑35 (MQ=255)                                 gAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCgcggcagcctgctgcaaggccggcgtggccaa                                                                                                                     <  6:351349‑M1/147‑33 (MQ=255)                                  aaaCCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGaa                                                                                                                  <  1:322464/148‑1 (MQ=255)                                    tcgcTGCGCCGTGATTACGCGCAGGGGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCGG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCGGGCCTTGGCCACGCC‑GGCCTTGCAGCAGTCTGCCGCGCGTTGCGTGAAGCt                                                                                                               <  8:343017/146‑1 (MQ=255)                                      ccTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGCGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCt                                                                                                               >  7:343017/1‑147 (MQ=255)                                      ccTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGt                                                                                                             <  3:299777/149‑1 (MQ=255)                                       cTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGGATGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTg                                                                                                              >  1:107209/1‑149 (MQ=255)                                           gcCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGaa                                                                                                                  <  2:310667/139‑1 (MQ=255)                                           gcCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGaa                                                                                                                  >  1:310667/1‑139 (MQ=255)                                             cGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGa                                                                                                      <  7:71458/149‑1 (MQ=255)                                                        gCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTCGCGTGAAGCTGTCTGGCGACATAGAGCTGt                                                                                           <  1:33337/149‑1 (MQ=255)                                                             tGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGCCCACGCC‑GGCCTTGCAGAAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGATTGCt                                                                                      >  4:311965/1‑149 (MQ=255)                                                              ggAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTc                                                                                     >  7:223658/1‑149 (MQ=255)                                                                    gcgcTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATg                                                                               >  3:98592/1‑149 (MQ=255)                                                                     cgcTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATg                                                                               <  1:119586/148‑1 (MQ=255)                                                                          tggtgAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCaa                                                                           <  1:278340/147‑1 (MQ=255)                                                                            gtgAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGgcg                                                                       >  5:355703/1‑149 (MQ=255)                                                                            gtgAACTGGACGTGGACCTCCTG‑‑TGCCGCGCCAACGATCTGTACGTGAGCCCCGGCCTGCCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGgc                                                                        <  8:58051/148‑1 (MQ=255)                                                                             tgAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGgcgc                                                                      <  8:223658/149‑1 (MQ=255)                                                                                  tGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATc                                                                 >  7:125593/1‑149 (MQ=255)                                                                                       gTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGAGATAGAGCTGt                                                                                           <  5:20921/118‑1 (MQ=255)                                                                                       gTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGt                                                                                           >  6:20921/1‑118 (MQ=255)                                                                                       gTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGc                                                            >  8:181107/1‑149 (MQ=255)                                                                                       gTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGc                                                            <  8:125593/149‑1 (MQ=255)                                                                                       gTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGc                                                            >  7:164758/1‑149 (MQ=255)                                                                                         ggACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCa                                                          >  2:243970/1‑149 (MQ=255)                                                                                         ggACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCa                                                          >  5:43802/1‑149 (MQ=255)                                                                                          gACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCAt                                                         <  7:198203/149‑1 (MQ=255)                                                                                            cTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCAt                                                         >  8:129109/1‑147 (MQ=255)                                                                                             ttCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAg                                                      >  3:130128/1‑149 (MQ=255)                                                                                                cTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTg                                                    <  5:256773/148‑1 (MQ=255)                                                                                                        cgcgCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCaa                                             <  1:358904/149‑1 (MQ=255)                                                                                                         gcgcCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCaa                                             >  1:86761/1‑149 (MQ=255)                                                                                                              aaCGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCaa                                       <  7:181107/149‑1 (MQ=255)                                                                                                              aaCGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCaa                                       <  2:107209/149‑1 (MQ=255)                                                                                                               aCGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGcc                                         >  3:146689/1‑146 (MQ=255)                                                                                                                cGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAaga                                     <  7:129109/149‑1 (MQ=255)                                                                                                                 gAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAagag                                    <  6:43802/149‑1 (MQ=255)                                                                                                                         cGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCa                            >  4:201651/1‑149 (MQ=255)                                                                                                                               ccccGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGc                      >  3:351539/1‑149 (MQ=255)                                                                                                                                cccGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCt                     >  6:269714/1‑149 (MQ=255)                                                                                                                                 ccGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTg                    >  8:201662/1‑149 (MQ=255)                                                                                                                                    gcgtggccaAGGCCAGGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTc                 >  1:246549/4‑149 (MQ=255)                                                                                                                                     cctggcctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCg                >  4:365755/1‑149 (MQ=255)                                                                                                                                      ctggcctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCgg               >  4:330156/1‑149 (MQ=255)                                                                                                                                       tggcctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGt              >  3:157998/1‑149 (MQ=255)                                                                                                                                         gcctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTc                             <  4:255822/132‑1 (MQ=255)                                                                                                                                         gcctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTc                             >  3:255822/1‑132 (MQ=255)                                                                                                                                         gcctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGt              <  4:98592/147‑1 (MQ=255)                                                                                                                                          cctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCgcgtggccaaggccaggccggggctcacgtacagctcgttggcgcggcacaggaagtccacgtccagttcaccacagcgcacttccacctgcgggtaatcacggcgcagggtttc           <  2:94661‑M2/149‑116 (MQ=255)                                                                                                                                           ctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGaaa          >  4:276128/1‑149 (MQ=255)                                                                                                                                           ctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGaaa          >  5:193816/1‑149 (MQ=255)                                                                                                                                            ttGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCgcgtggccaaggccaggccggggctcacgtacagctcgttggcgcggcacaggaagtccacgtccagttcaccacagcgcacttccacctgcgggtaatcacggcgcagggtttc           <  6:351349‑M2/147‑116 (MQ=255)                                                                                                                                            ttGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGc                                          >  1:95489/1‑116 (MQ=255)                                                                                                                                            ttGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGc                                          <  2:95489/116‑1 (MQ=255)                                                                                                                                              ggCCACGCC‑GGCCTTGCAGCAGGCTGCCGCgcgtggccaaggccaggccggggctcacgtacagctcgttggcgcggcacaggaagtccacgtccagttcaccacagcgcacttccacctgcgggtaatcacggcgcagggtttcca         >  5:351349‑M2/1‑30 (MQ=255)                                                                                                                                              ggCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATg        <  3:276128/148‑1 (MQ=255)                                                                                                                                               gCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGc                                          >  2:293485/1‑113 (MQ=255)                                                                                                                                                ccACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGgcc     >  5:29696/1‑149 (MQ=255)                                                                                                                                                 cACGCC‑GGACTTGCAGCAGGCTGCCGCgcgtggccaaggccaggccggggctcacgtacagctcgttgtcgcggcacaggaagtccacctccagttcacaacagcgcacttccacctgagggtaatcacggcgcacggtttccagtt      <  3:89504‑M2/147‑121 (MQ=255)                                                                                                                                                  aCGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGgccgc   >  1:154284/1‑149 (MQ=255)                                                                                                                                                    gcgcggcagcctgctgcaaggccggcgtggccaaggccaggccggggctcacgtacagctcgttggcgcggcacaggaagtccacgtccagttcaccacagcgcacttccacctgcgggtaatcacggcgcagggtttccagttccggc  >  2:243121‑M1/1‑2 (MQ=255)                                                                                                                                                     |                                                                                                                                                    TCGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGCCGCC  >  NC_002947/1520853‑1521145

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.