New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1520999	65 (1.080)	4 (0.070)	4/252	NT	6.3%	coding (256/1353 nt)	murD	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
	?	NC_002947	= 1521021	58 (1.020)					coding (278/1353 nt)	murD	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase

GCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGCCGCCAAGGCCGGCAAACGCGTGGCCG  >  NC_002947/1520875‑1521167                                                                                                                                                      |                                                                                                                                                   gccgGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCgc                                                                                                                                                  >  2:243121‑M2/1‑147 (MQ=255)          ggAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCgcgtggcgtg                                                                                                                                          >  2:33337/1‑148 (MQ=255)           gcaaCCCTGCGCCGTTAGTAACCGCAGGTGGAATGGCGCTGTGGTGAACTGGACGGTGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGa                                                                                                                                         <  8:351586/146‑1 (MQ=255)            aaaCCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGaa                                                                                                                                        <  1:322464/148‑1 (MQ=255)              tcgcTGCGCCGTGATTACGCGCAGGGGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCGG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCGGGCCTTGGCCACGCC‑GGCCTTGCAGCAGTCTGCCGCGCGTTGCGTGAAGCt                                                                                                                                     <  8:343017/146‑1 (MQ=255)                ccTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGCGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCt                                                                                                                                     >  7:343017/1‑147 (MQ=255)                ccTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGt                                                                                                                                   <  3:299777/149‑1 (MQ=255)                 cTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGGATGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTg                                                                                                                                    >  1:107209/1‑149 (MQ=255)                     gcCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGaa                                                                                                                                        <  2:310667/139‑1 (MQ=255)                     gcCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGaa                                                                                                                                        >  1:310667/1‑139 (MQ=255)                       cGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGa                                                                                                                            <  7:71458/149‑1 (MQ=255)                                  gCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTCGCGTGAAGCTGTCTGGCGACATAGAGCTGt                                                                                                                 <  1:33337/149‑1 (MQ=255)                                       tGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGCCCACGCC‑GGCCTTGCAGAAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGATTGCt                                                                                                            >  4:311965/1‑149 (MQ=255)                                        ggAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTc                                                                                                           >  7:223658/1‑149 (MQ=255)                                              gcgcTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATg                                                                                                     >  3:98592/1‑149 (MQ=255)                                               cgcTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATg                                                                                                     <  1:119586/148‑1 (MQ=255)                                                    tggtgAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCaa                                                                                                 <  1:278340/147‑1 (MQ=255)                                                      gtgAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGgcg                                                                                             >  5:355703/1‑149 (MQ=255)                                                      gtgAACTGGACGTGGACCTCCTG‑‑TGCCGCGCCAACGATCTGTACGTGAGCCCCGGCCTGCCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGgc                                                                                              <  8:58051/148‑1 (MQ=255)                                                       tgAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGgcgc                                                                                            <  8:223658/149‑1 (MQ=255)                                                            tGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATc                                                                                       >  7:125593/1‑149 (MQ=255)                                                                 gTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGAGATAGAGCTGt                                                                                                                 <  5:20921/118‑1 (MQ=255)                                                                 gTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGt                                                                                                                 >  6:20921/1‑118 (MQ=255)                                                                 gTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGc                                                                                  >  7:164758/1‑149 (MQ=255)                                                                 gTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGc                                                                                  >  8:181107/1‑149 (MQ=255)                                                                 gTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGc                                                                                  <  8:125593/149‑1 (MQ=255)                                                                   ggACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCa                                                                                >  5:43802/1‑149 (MQ=255)                                                                   ggACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCa                                                                                >  2:243970/1‑149 (MQ=255)                                                                    gACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCAt                                                                               <  7:198203/149‑1 (MQ=255)                                                                      cTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCAt                                                                               >  8:129109/1‑147 (MQ=255)                                                                       ttCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAg                                                                            >  3:130128/1‑149 (MQ=255)                                                                          cTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTg                                                                          <  5:256773/148‑1 (MQ=255)                                                                                  cgcgCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCaa                                                                   <  1:358904/149‑1 (MQ=255)                                                                                   gcgcCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCaa                                                                   >  1:86761/1‑149 (MQ=255)                                                                                        aaCGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCaa                                                             <  7:181107/149‑1 (MQ=255)                                                                                        aaCGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCaa                                                             <  2:107209/149‑1 (MQ=255)                                                                                         aCGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGcc                                                               >  3:146689/1‑146 (MQ=255)                                                                                          cGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAaga                                                           <  7:129109/149‑1 (MQ=255)                                                                                           gAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAagag                                                          <  6:43802/149‑1 (MQ=255)                                                                                                   cGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCa                                                  >  4:201651/1‑149 (MQ=255)                                                                                                         ccccGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGc                                            >  3:351539/1‑149 (MQ=255)                                                                                                          cccGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCt                                           >  6:269714/1‑149 (MQ=255)                                                                                                           ccGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTg                                          >  8:201662/1‑149 (MQ=255)                                                                                                              gcgtggccaAGGCCAGGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTc                                       >  1:246549/4‑149 (MQ=255)                                                                                                               cctggcctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCg                                      >  4:365755/1‑149 (MQ=255)                                                                                                                ctggcctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCgg                                     >  4:330156/1‑149 (MQ=255)                                                                                                                 tggcctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGt                                    >  3:157998/1‑149 (MQ=255)                                                                                                                   gcctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTc                                                   <  4:255822/132‑1 (MQ=255)                                                                                                                   gcctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTc                                                   >  3:255822/1‑132 (MQ=255)                                                                                                                   gcctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGt                                    <  4:98592/147‑1 (MQ=255)                                                                                                                    cctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCgcgtggccaaggccaggccggggctcacgtacagctcgttggcgcggcacaggaagtccacgtccagttcaccacagcgcacttccacctgcgggtaatcacggcgcagggtttc                                 <  2:94661‑M2/149‑116 (MQ=255)                                                                                                                     ctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGaaa                                >  5:193816/1‑149 (MQ=255)                                                                                                                     ctTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGaaa                                >  4:276128/1‑149 (MQ=255)                                                                                                                      ttGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCgcgtggccaaggccaggccggggctcacgtacagctcgttggcgcggcacaggaagtccacgtccagttcaccacagcgcacttccacctgcgggtaatcacggcgcagggtttc                                 <  6:351349‑M2/147‑116 (MQ=255)                                                                                                                      ttGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGc                                                                <  2:95489/116‑1 (MQ=255)                                                                                                                      ttGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGc                                                                >  1:95489/1‑116 (MQ=255)                                                                                                                        ggCCACGCC‑GGCCTTGCAGCAGGCTGCCGCgcgtggccaaggccaggccggggctcacgtacagctcgttggcgcggcacaggaagtccacgtccagttcaccacagcgcacttccacctgcgggtaatcacggcgcagggtttcca                               >  5:351349‑M2/1‑30 (MQ=255)                                                                                                                        ggCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATg                              <  3:276128/148‑1 (MQ=255)                                                                                                                         gCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGc                                                                >  2:293485/1‑113 (MQ=255)                                                                                                                          ccACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGgcc                           >  5:29696/1‑149 (MQ=255)                                                                                                                           cACGCC‑GGACTTGCAGCAGGCTGCCGCgcgtggccaaggccaggccggggctcacgtacagctcgttgtcgcggcacaggaagtccacctccagttcacaacagcgcacttccacctgagggtaatcacggcgcacggtttccagtt                            <  3:89504‑M2/147‑121 (MQ=255)                                                                                                                            aCGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGgccgc                         >  1:154284/1‑149 (MQ=255)                                                                                                                                c‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGCCGCCAAg                     <  4:157998/149‑1 (MQ=255)                                                                                                                                    ccTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGCCGCCAAGGcc                  <  6:355703/149‑1 (MQ=255)                                                                                                                                      ttGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCATCGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGACGCCAAgcacgg                >  1:320180/1‑144 (MQ=255)                                                                                                                                      ttGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGCCGCCAAGGCCgg                >  7:124141/1‑149 (MQ=255)                                                                                                                                        gcagcaGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGCCGCCAAGGCCGGc               >  4:168111/1‑148 (MQ=255)                                                                                                                                               gCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGCCGCCAAGGCCGGCAAACGCGt       <  3:365755/149‑1 (MQ=255)                                                                                                                                                   ccGCgcgtggccaaggccaggccggggctcacgtacagctcgttggcgcggcacaggaagtccacgtccagttcaccacagcgcacttccacctgcgggtaatcacggcgcagggtttccagttccggcggctgctcgcgggtatcggc   >  1:94661‑M2/1‑4 (MQ=255)                                                                                                                                                   ccGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGCCGCCAAGGCCGGCAAACGCGTGGcc   <  5:167445/149‑1 (MQ=255)                                                                                                                                                   ccGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGCCGCCAAGGCCGGCAAACGCGTGGcc   <  3:201651/149‑1 (MQ=255)                                                                                                                                                    cgcgcgTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGCCGCCAAGGCCGGCAAACGCGTGGCCg  >  3:283001/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                   GCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTG‑‑TGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCC‑GGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGCCGCCAAGGCCGGCAAACGCGTGGCCG  >  NC_002947/1520875‑1521167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.