New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1527833 =	48 (0.800)	3 (0.050)	3/258	NT	6.3%	coding (174/1263 nt)	ftsA	cell division protein FtsA
	?	NC_002947	1527882 =	42 (0.720)					coding (223/1263 nt)	ftsA	cell division protein FtsA

ATCGTCGGGCTGGACATTGGCACCTCCAAGGTGGTGGCGCTGGTGGGCGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCC  >  NC_002947/1527687‑1527975                                                                                                                                                    |                                                                                                                                               ggccggaatcgccacggcctgggcggcgtcgagtacgcgctccaggtcggccaggctgacttcgcggtcacggatggcgacgatgccgtgagagttcaggctgcggatgtggttaccggccacaccgacgaacgccgagtggatacgg                                                                                                                                                <  2:48691‑M1/1‑1 (MQ=255) ggccggaatcgccacggcctgggcggcgtcgagtacgcgctccaggtcggccaggctgacttcgcggtcacggatggcgacgatgccgtgagagttcaggctgcggatgtggttaccggccacaccgacgaacgccgagtggatacgg                                                                                                                                                <  2:45290‑M1/1‑1 (MQ=255) ggccggaatcgccacggcctgggcggcgtcgagtacgcgctccaggtcggccaggctgacttcgcggtcacggatggcgacgatgccgtgagagttcaggctgcggatgtggttaccggccacaccgacgaacgccgagtggatacgGc                                                                                                                                               <  3:344656‑M1/2‑1 (MQ=255)   cgtcgGGCTGGACATTGGCACCTCCAAGGTGGTGGCGCTGGTGGGCGAAGTGGGCGAAGACGCCACCCTGGAAATCGTCGGGATCGGTACCCATACGTACCGTGGCCTGATAAAAGGCGTGGTGGTGAA‑CATCGAGTCCAACGTGCAg                                                                                                                                             >  6:118698/1‑148 (MQ=255)       gggCTGGACATTGGCACCTCCAAGGTGGTGGCGCTGGTGGGCGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGa                                                                                                                                         <  5:355119/148‑1 (MQ=255)                   ggCACCTCCAAGGTGGTGGCGCTGGTGGGCGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGGGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCg                                                                                                                             <  7:106688/148‑1 (MQ=255)                     cACCTCCAAGGTGGTGGCGCTGGTGGGCGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTgg                                                                                                                          <  6:111106/149‑1 (MQ=255)                     cACCTCCAAGGTGGTGGCGCTGGTGGGCGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTgg                                                                                                                          <  6:146747/149‑1 (MQ=255)                        cTCCAAGGTGGTGGCGCTGGTGGGCGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTgg                                                                                                                          >  7:322018/1‑146 (MQ=255)                        cTCCAAGGTGGTGGCGCTGGTGGGCGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTgg                                                                                                                          >  5:124841/1‑146 (MQ=255)                         tCCAAGGTGGTGGCGCTGGTGGGCGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGaa                                                                                                                        >  2:363366/1‑147 (MQ=255)                           cAAGGTGGTGGCGCTGGTGGGCGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAgg                                                                                                                    >  4:312683/1‑149 (MQ=255)                           cAAGGTGGTGGCGCTGGTGGGCGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAgg                                                                                                                    >  3:8860/1‑149 (MQ=255)                              ggtggtGGCGCTGGTGGGCGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGgcgc                                                                                                                 <  8:16157/149‑1 (MQ=255)                               gtggtgGCGCTGGTGGGCGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGgcg                                                                                                                  >  1:229879/1‑147 (MQ=255)                                     gcgcTGGTGGGCGAAGGGGGCGAAGACGGCACCCTGGAAATCGTCGGTATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGAt                                                                                                          <  5:196773/149‑1 (MQ=255)                                      cgcTGGTGGGCGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTTAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATg                                                                                                         <  8:334332/149‑1 (MQ=255)                                       gcTGGTGGGCGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATgg                                                                                                        <  6:124841/149‑1 (MQ=255)                                        cTGGTGGGCGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGc                                                                                                       <  1:363366/149‑1 (MQ=255)                                          ggggggcgaagggggcgaagACGGCACCCTGGAAATCGTCGGGATCGGTACCCCTCCGGCCCGGGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGCGGCCCCCGTGCCGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCg                                                                                                     <  3:306203/146‑1 (MQ=255)                                           gtgggcgacgtgggcgaaGACTGCACCCTGGAAATCGTCGGGAGCGGTACCCATCCGTACCGTGGCCTGAAAAACGGCGTTGTGGTGCA‑CATCTAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCg                                                                                                     <  3:311362/148‑1 (MQ=255)                                           gtgggcgaagtgggcgaaGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCgg                                                                                                    >  3:140949/1‑149 (MQ=255)                                               gcgaagtgggcgaagACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGc                                                                                                <  7:28478/149‑1 (MQ=255)                                                cgaagtgggcgaagACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGcc                                                                                               >  6:27636/1‑149 (MQ=255)                                                 ggccaggctgacttcgcggtcacggatggcgacgatgccgtgagagttcaggctgcggatgtggttaccggccacaccgacgaacgccgagtggatacgGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGcc                                                                                               >  5:128803‑M1/100‑149 (MQ=255)                                                     tgggcgaagACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATc                                                                                          <  5:27636/149‑1 (MQ=255)                                                         cgaagACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACt                                                                                      <  8:322018/149‑1 (MQ=255)                                                                ggCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGtt                                                                               >  4:177839/1‑149 (MQ=255)                                                                ggCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGtt                                                                               >  4:41056/1‑149 (MQ=255)                                                                      cTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCgg                                                                         >  2:258434/1‑149 (MQ=255)                                                                               gtcgGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCg                                                                 <  2:229879/148‑1 (MQ=255)                                                                               gacgatgccgtgagagttcaggctgcggatgtggttaccggccacaccgacgaacgccgagtggatacgGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGt                                                                                             <  7:293735‑M1/52‑1 (MQ=255)                                                                               gacgatgccgtgagagttcaggctgcggatgtggttaccggccacaccgacgaacgccgagtggatacgGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGt                                                                                             >  8:293735‑M1/70‑121 (MQ=255)                                                                                  gggATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTaa                                                             <  1:258434/149‑1 (MQ=255)                                                                                     aTCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCAGGTAAcc                                                           >  7:115153/1‑148 (MQ=255)                                                                                         gTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATc                                                      >  1:300208/1‑149 (MQ=255)                                                                                         gTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATc                                                      >  3:257736/1‑149 (MQ=255)                                                                                           aCCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACAt                                                       <  1:247623/146‑1 (MQ=255)                                                                                           aCCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACAt                                                       >  2:247623/1‑146 (MQ=255)                                                                                                   gTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAATCATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAGCCt                                              >  1:45290/1‑148 (MQ=255)                                                                                                   gTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAg                                                 <  6:223086/144‑1 (MQ=255)                                                                                                   gTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAg                                                 >  5:223086/1‑144 (MQ=255)                                                                                                        gTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAGCCTGAActct                                       >  4:320164/1‑149 (MQ=255)                                                                                                           gCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCAc                                    >  5:134129/1‑149 (MQ=255)                                                                                                             cTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGGTGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACgg                                  >  4:9593/1‑149 (MQ=255)                                                                                                                           ggtggtgAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATcc                    <  4:8860/149‑1 (MQ=255)                                                                                                                               gtgAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCAt                               <  8:98648/134‑1 (MQ=255)                                                                                                                               gtgAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCAt                               >  7:98648/1‑134 (MQ=255)                                                                                                                                     cATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACcgcg           <  7:73826/149‑1 (MQ=255)                                                                                                                                       tCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGaa         <  2:300208/149‑1 (MQ=255)                                                                                                                                              cACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATcc                    <  3:358797/131‑1 (MQ=255)                                                                                                                                              cACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATcc                    >  4:358797/1‑131 (MQ=255)                                                                                                                                              cACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGcc  <  3:41056/149‑1 (MQ=255)                                                                                                                                              cACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGcc  >  4:268004/1‑149 (MQ=255)                                                                                                                                              cACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGc   <  4:140949/148‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                               ATCGTCGGGCTGGACATTGGCACCTCCAAGGTGGTGGCGCTGGTGGGCGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCC  >  NC_002947/1527687‑1527975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.