New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1527833 =	48 (0.800)	3 (0.050)	3/258	NT	6.3%	coding (174/1263 nt)	ftsA	cell division protein FtsA
	?	NC_002947	1527882 =	42 (0.720)					coding (223/1263 nt)	ftsA	cell division protein FtsA

CGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAGCGCGTACTCGACGCCGCCCAGGCCGTGGCGATTCCGGCCGA  >  NC_002947/1527734‑1528030                                                                                                                                                      |                                                                                                                                                      cgaagtgggcgaagACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGcc                                                                                                                                                       >  6:27636/1‑149 (MQ=255)  ggccaggctgacttcgcggtcacggatggcgacgatgccgtgagagttcaggctgcggatgtggttaccggccacaccgacgaacgccgagtggatacgGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGcc                                                                                                                                                       >  5:128803‑M1/100‑149 (MQ=255)      tgggcgaagACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATc                                                                                                                                                  <  5:27636/149‑1 (MQ=255)          cgaagACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACt                                                                                                                                              <  8:322018/149‑1 (MQ=255)                 ggCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGtt                                                                                                                                       >  4:41056/1‑149 (MQ=255)                 ggCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGtt                                                                                                                                       >  4:177839/1‑149 (MQ=255)                       cTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑gg                                                                                                                                >  2:258434/1‑149 (MQ=255)                                gtcgGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCg                                                                                                                        <  2:229879/148‑1 (MQ=255)                                gacgatgccgtgagagttcaggctgcggatgtggttaccggccacaccgacgaacgccgagtggatacgGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGt                                                                                                                                                     >  8:293735‑M1/70‑121 (MQ=255)                                gacgatgccgtgagagttcaggctgcggatgtggttaccggccacaccgacgaacgccgagtggatacgGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGt                                                                                                                                                     <  7:293735‑M1/52‑1 (MQ=255)                                   gggATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTaa                                                                                                                    <  1:258434/149‑1 (MQ=255)                                      aTCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCAGGTAAcc                                                                                                                  >  7:115153/1‑148 (MQ=255)                                          gTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATc                                                                                                             >  3:257736/1‑149 (MQ=255)                                          gTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATc                                                                                                             >  1:300208/1‑149 (MQ=255)                                            aCCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACAt                                                                                                              >  2:247623/1‑146 (MQ=255)                                            aCCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACAt                                                                                                              <  1:247623/146‑1 (MQ=255)                                                    gTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAATCATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCt                                                                                                     >  1:45290/1‑148 (MQ=255)                                                    gTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAg                                                                                                        <  6:223086/144‑1 (MQ=255)                                                    gTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAg                                                                                                        >  5:223086/1‑144 (MQ=255)                                                         gTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAActct                                                                                              >  4:320164/1‑149 (MQ=255)                                                            gCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCAc                                                                                           >  5:134129/1‑149 (MQ=255)                                                              cTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGGTGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACgg                                                                                         >  4:9593/1‑149 (MQ=255)                                                                            ggtggtgAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATcc                                                                           <  4:8860/149‑1 (MQ=255)                                                                                gtgAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCAt                                                                                      <  8:98648/134‑1 (MQ=255)                                                                                gtgAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCAt                                                                                      >  7:98648/1‑134 (MQ=255)                                                                                      cATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACcgcg                                                                  <  7:73826/149‑1 (MQ=255)                                                                                        tCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGaa                                                                <  2:300208/149‑1 (MQ=255)                                                                                               cACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATcc                                                                           >  4:358797/1‑131 (MQ=255)                                                                                               cACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATcc                                                                           <  3:358797/131‑1 (MQ=255)                                                                                               cACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGcc                                                         >  4:268004/1‑149 (MQ=255)                                                                                               cACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGcc                                                         <  3:41056/149‑1 (MQ=255)                                                                                               cACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGc                                                          <  4:140949/148‑1 (MQ=255)                                                                                                  acggcagccggccatcagctgcgcctcttccacggcgcgctggatcgactgcCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCAtcgtc                                                                                  >  8:293735‑M2/53‑121 (MQ=255)                                                                                                  acggcagccggccatcagctgcgcctcttccacggcgcgctggatcgactgcCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCAtcgtc                                                                                  <  7:293735‑M2/69‑1 (MQ=255)                                                                                                    ggcagccggccatcagctgcgcctcttccacggcgcgctggatcgactgcCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGcc                                                    >  5:128803‑M2/51‑149 (MQ=255)                                                                                                           gATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCAGCGGTGCCCGCGAAGTCAGCCTGGCCGACCTgg                                             >  6:361742/1‑149 (MQ=255)                                                                                                             tCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAg                                           >  5:254357/1‑149 (MQ=255)                                                                                                               cAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTgggcgg                                         >  4:232417/1‑145 (MQ=255)                                                                                                               cAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAgc                                          <  6:134129/148‑1 (MQ=255)                                                                                                                aGCGGGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAgcgc                                        <  5:118698/149‑1 (MQ=255)                                                                                                                   gcgcCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAGCGCGTa                                     <  2:187206/149‑1 (MQ=255)                                                                                                                           gAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTCGGGGGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAGCGCGTACTCGAcg                              >  1:92292/1‑149 (MQ=255)                                                                                                                            aaGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAGCGCGTACTCGAcgcc                            >  2:171966/1‑149 (MQ=255)                                                                                                                                   gcAGCTGATGTCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTCTTGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAGCGCGTACTCGACGCCGCCCAgg                     <  8:115153/149‑1 (MQ=255)                                                                                                                                        tGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAGCGCGTACTCGACGCCGCCCAGGCCGTg                <  4:257736/149‑1 (MQ=255)                                                                                                                                          aTGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAGCGCGTACTCGACGCCGCCCAGGCCGTgg               <  3:177839/148‑1 (MQ=255)                                                                                                                                           tGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAGCGCGTACTCGACGCCGCCCAGGCCGTGGc              >  1:48691/1‑148 (MQ=255)                                                                                                                                            ggCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAGCGCGTACTCGACGCCGCCCAGGCCGTGGCGa            >  2:19678/1‑149 (MQ=255)                                                                                                                                            ggCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAGCGCGTACTCGACGCCGCCCAGGCCGTGGCGa            >  4:344656/1‑149 (MQ=255)                                                                                                                                             gCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTTGAGCGCGTACTCGACGCCGCCCAGGCCGTGGCGAt           >  7:77154/1‑149 (MQ=255)                                                                                                                                             gCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAGCGCGTACTCGACGCCGCCCAGGCCGTGGCGa            <  3:312683/148‑1 (MQ=255)                                                                                                                                                    gcCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAGCGCGTACTCGACGCCGCCCAGGCCGTGGCGATTCCGGcc    <  3:344656‑M2/147‑1 (MQ=255)                                                                                                                                                     cCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAGCGCGTACTCGACGCCGCCCAGGCCGTGGCGATTCCGGcc    <  2:45290‑M2/147‑1 (MQ=255)                                                                                                                                                     cCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAGCGCGTACTCGACGCCGCCCAGGCCGTGGCGATTCCGGcc    <  2:48691‑M2/147‑1 (MQ=255)                                                                                                                                                      cGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAGCGCGTACTCGACGCCGCCCAGGCCGTGGCGATTCCGGCCGa  <  6:143961/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                      CGAAGTGGGCGAAGACGGCACCCTGGAAATCGTCGGGATCGGTACCCATCCGTCCCGTGGCCTGAAAAAAGGCGTGGTGGTGAA‑CATCGAGTCCACCGTGCAGTCGATCCAGCGCGCCGTGGAAGAGGCGCAGCTGATGGCCGGCTGCCGTATCCACTCGGCGTTCGTC‑GGTGTGGCCGGTAACCACATCCGCAGCCTGAACTCTCACGGCATCGTCGCCATCCGTGACCGCGAAGTCAGCCTGGCCGACCTGGAGCGCGTACTCGACGCCGCCCAGGCCGTGGCGATTCCGGCCGA  >  NC_002947/1527734‑1528030

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.